Gene Daud_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1714 
Symbol 
ID6025820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1804591 
End bp1806312 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content65% 
IMG OID641594533 
ProductS-layer domain-containing protein 
Protein accessionYP_001717844 
Protein GI169831862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAAT TATATGCGAA CCGGACACTG ATGGGCAACA TCGCCCTGGT GGTGTTCCTC 
GCGTTTCTGG TGACTCTTAC CCTTGGAAGC TTTACTCCGG CGGCTGCCCA GTCAGGAGAA
CAGACACGCC AAATCACGGT TCTGGACAAA GACGGTCGAT TCCAAACGGA GAGAGCCATC
CTTAGGACCG ACCAGGATAG AACGAAAGTC ACCCTGACCA TTCGGATTAC GCCGTTGACC
CAGGACGACT TCAGCAACAT CTGGTTTGTG ATCCGCGATG GGCAGAGGGT GCTCAAGACG
GTTTACGCCT CCGACGCAAC CTATTCCGAG GTCTACAGCG AGGTCTACGG TGCGGGCTAT
CAGTTTGTTT ACGCCTGGGC GTACAGCTTC ACCGGCTTAC TGCCTCTCGA AGTCTCGCTT
GTGGTTTACG AATCCGGTAA ACAGCCCAAA TCCATTGCTC TCACCATCGA GGCACCGCCA
CCTAGACCCG CTCCCGGCCC CGGTCCTGCT CCGGCTCCGG CGCCGGTGAA GCATGAAGTG
GCCACCGGCA CCGTCGAGGT CAAGGACGGC TTGGGCACTC TGACCGTCGA CGCGGCCAAG
GTCGAGAAAA TGCTGGCCGA TCCGGCCGTG AAGGCGGTCG TGTTCAGCAT CCCGACCAAC
CTTGCCACCC AAGGCACCGT CGCCGTTTCG GCCGACCTCC TGGCCAGGGT GCTGGAGGGC
AACCGGTCTG CCGTGGTGGA GATCGGCGGC GCCAAGCTGG CGATCCCGCC GGGCGCGCTT
GATCTCAGCG CCTTCAAGGG TCAGAACGTC ACGCTCAACC TGAGCGTCAC CAAGGGCGAG
TCCCCCGTAC CGGCGGCCGC GGCTTACCGC ATCGCCGGCG AGGTCTACCG CTTCAGCATT
GAGGCGTACG CGGCCGGAGA GCGCAAGGGC GCGATCCGGA ACTTCGACAA GCCGATCACG
CTGACCCTGC CGTACGACCC GGCGAAACTG GCGGGCGCGC GCGAGGACGA CCTCAGCCTG
TTCCGGTACA ACGAGACCGC CAAGAGATGG GATGCCGTGC CCGGTTCCAC GGTCGACAAG
CGGAACAAGA CCGTTTCGGC GCCGCGCGAC TCCCTCAGTC TGTACACCGT GATGGTCCGC
GTGTTCACCC CGCCGCAGTT CACGGACATC AGCGGGCACT GGGCGGAACA CGACATCAAC
CTGATGGCGG GCAAGGGCAT TGCGGGCGGC TACCCGGACG GCACCTTCCG GCCGAACGCG
AACGTCACTC GGGCGCAGTT TGCGGCCCTG CTGATCCGCA CCCTCGGCAT CACCGAGCAG
GCGGCTAAGG GCGGCAGGTT CACGGATGTG GCGGCCAAAG CCTGGTACGC GGGCGCGGTG
GAAACCGCGG CGGCGGCCGG CCTGGTGGGC GGCTACCCGG ACGGCAGCTT TAAGCCGAAC
GCGAACATCA CCCGCCAGGA GCTGGCGGCG ATGGTGACGC GCGGACTGGC CTACCAGGGC
AAGGACGTCA AGCTTAGCGC CGCCGAGGTG GAAGCCATCC TGGCGCGGTT CAGCGACGCC
GCCAAGATCA GTCCCTGGGC CCGGAACGTA GCGGCGGTCG CGGCCGATCA GGGCATCGTC
GGCGGTCGCA CCGGAAATAC GTTCGCCCCG CAGGAGAACG CCACCCGGGC GGAAGCCATC
GTGATGCTCA AGCGCATGCT GGCGGCCACA GGCAAGCTGT AA
 
Protein sequence
MGKLYANRTL MGNIALVVFL AFLVTLTLGS FTPAAAQSGE QTRQITVLDK DGRFQTERAI 
LRTDQDRTKV TLTIRITPLT QDDFSNIWFV IRDGQRVLKT VYASDATYSE VYSEVYGAGY
QFVYAWAYSF TGLLPLEVSL VVYESGKQPK SIALTIEAPP PRPAPGPGPA PAPAPVKHEV
ATGTVEVKDG LGTLTVDAAK VEKMLADPAV KAVVFSIPTN LATQGTVAVS ADLLARVLEG
NRSAVVEIGG AKLAIPPGAL DLSAFKGQNV TLNLSVTKGE SPVPAAAAYR IAGEVYRFSI
EAYAAGERKG AIRNFDKPIT LTLPYDPAKL AGAREDDLSL FRYNETAKRW DAVPGSTVDK
RNKTVSAPRD SLSLYTVMVR VFTPPQFTDI SGHWAEHDIN LMAGKGIAGG YPDGTFRPNA
NVTRAQFAAL LIRTLGITEQ AAKGGRFTDV AAKAWYAGAV ETAAAAGLVG GYPDGSFKPN
ANITRQELAA MVTRGLAYQG KDVKLSAAEV EAILARFSDA AKISPWARNV AAVAADQGIV
GGRTGNTFAP QENATRAEAI VMLKRMLAAT GKL