| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1700 |
|---|
| Symbol | |
|---|
| ID | 6027673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1791627 |
|---|
| End bp | 1792367 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641594520 |
|---|
| Product | hexapaptide repeat-containing transferase |
|---|
| Protein accession | YP_001717831 |
|---|
| Protein GI | 169831849 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCACCGAG TAAATATTCA TCCAACGGCG ATTGTTGAGA CTTCATCGCT CGGTGACAAT
GTCACCGTAC ATGCCTTTGC CGTAGTGCGC GACGGAGCGA CGCTTGGAAA TAACGTGGTA
ATACACCCTT ATGTGGTTAT TGAGTCCGGA GTTATCCTGG GTGATAACGT AGAGGTTTTT
CCTGGTGCGT ATGTCGGTAA GGTGCCTAAG GGAGCCGGAG TCCTTGCTCG CACACCAAGG
TTCGAGCCTT TTGTTCAAAT TGGAGCTAAT TGTTCGATAG GTCCTCATGT GGTGATCTAT
TACGACATTA AAATTGGTGA AAATACCCTT ATTGGAGACG GTGCTTCCAT CCGCGAGTTA
TGCCGCATTG GTTCCCGTTG CGTGGTGGGG CGTCATGTGA CTTTGAATTA TAATACCTCG
GTTGGAGATG ATATCAAAAT TATGGATCAT TCTTGGCTGG CTGGAAACAT GCGAGTAGGA
AACCGTGTGT TTATTAGTGG CGGTGTACTT ACTGCCAATG ATAACATGAT GGGTAAACAT
GGATATCAAG AGGAGCGTAT CGTTGGTCCC TCCATTTGTG ATGACGCAGT GATCGGTGCG
GGTGCGATTC TCCTTCCAGG AGTAGTTATT GGTGAAGAGG CAATTGTGGG GGCCGGGGCT
GTAGTGACGA GGGACGTGCC TCCCCGTACT GTTGTAATGG GTATCCCGGC CAGGGCACGT
ATAAGCCTGG AGGGTGAATG A
|
|---|
| Protein sequence | MHRVNIHPTA IVETSSLGDN VTVHAFAVVR DGATLGNNVV IHPYVVIESG VILGDNVEVF
PGAYVGKVPK GAGVLARTPR FEPFVQIGAN CSIGPHVVIY YDIKIGENTL IGDGASIREL
CRIGSRCVVG RHVTLNYNTS VGDDIKIMDH SWLAGNMRVG NRVFISGGVL TANDNMMGKH
GYQEERIVGP SICDDAVIGA GAILLPGVVI GEEAIVGAGA VVTRDVPPRT VVMGIPARAR
ISLEGE
|
|---|
| |