Gene Daud_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1686 
Symbol 
ID6025932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1779484 
End bp1780341 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content68% 
IMG OID641594507 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001717818 
Protein GI169831836 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGTAT TGGTGACCGG TGCTCAGGGG ATGCTCGGGC GGGCGGTGGC GGCGGAGGCC 
GGGGCCCGCG GATGGGCGGT CGTACGCCTG GGTCGCACCG ACCTGGACAT CACGGACTTG
ACGGCCGTGA GGTCGGCCCT GCGGGAGTAC CGGCCGGATG CAGTGGTAAA TTGTGCCGCC
TATACCGATG TCGACGGCGC GGAGACGGCG CGGGAGAGGG CCTTCGCTGT GAACGGCCTG
GGCCCGCGGA ATCTGGCCCT GGCCTGCCGG GAGACCGGTG TGGACCTGCT GCACATCAGC
ACCGACTACA TTTTTGACGG CCGTAAGGAC GGCCCCTACG GCGTGTACGA CGACCCGTGC
CCGGTCAACG TTTACGGGGC CAGCAAACTG TGGGGGGAGC GGGCGATAGC CTCCCTGGCG
TCGCGCTTCT ACATCGTGCG CGTGAGCTGG CTTTTTGCGC CCTGGGGCAA GAACTTCGTG
GCCACTATGC TGCGCCTGGG GCGGGAGCGG GAGAGCCTGC GGGTGGTCGA TGACCAGTAC
GGCTGCCCGA CCTATGCGCC CGATCTGGCG CGGTTGCTTC TGGACCTCAT CGCGACACGT
TGCTATGGGG TCTACCACGC GACCAACCAG GGGGTGACGA GCTGGTGCGG CTTCGCCCGG
GCGATAATGA AGCAGGCTGG GCTGCCGGCG AGGGTTGAGC CCTGCACCTC GGCGGAGTTT
CCGCGTCCGG CGCGGCGGCC GGCCAACTCG GTCCTGGATC CTTTCCCCCT GCGGGAGACG
GTGGGCTACC TGCTGCCGCC ATGGGAGGAC GCCCTGGAGC GCTGTTTAAA GGAGATGCGC
AAGGAGGAAC TGCTGTGA
 
Protein sequence
MRVLVTGAQG MLGRAVAAEA GARGWAVVRL GRTDLDITDL TAVRSALREY RPDAVVNCAA 
YTDVDGAETA RERAFAVNGL GPRNLALACR ETGVDLLHIS TDYIFDGRKD GPYGVYDDPC
PVNVYGASKL WGERAIASLA SRFYIVRVSW LFAPWGKNFV ATMLRLGRER ESLRVVDDQY
GCPTYAPDLA RLLLDLIATR CYGVYHATNQ GVTSWCGFAR AIMKQAGLPA RVEPCTSAEF
PRPARRPANS VLDPFPLRET VGYLLPPWED ALERCLKEMR KEELL