| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1638 |
|---|
| Symbol | |
|---|
| ID | 6027339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1728038 |
|---|
| End bp | 1729321 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641594461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717772 |
|---|
| Protein GI | 169831790 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4198] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCCAGAA TCCTGCCCAT CCGGGGACTG CGCTACAACC CGGCAGTGGT CGAAGACTTG
TCCCTGGTCG TCACCCCGCC CTACGACGTG ATCGACGAGG AAGCCCAGAA CCGCTACTAC
GAACGTCATC CGCACAACAT CATCCGTCTG GAATACAACC GGATCCACCC CGGGGACACC
GCGGCCGACA ACCGGTACAC GCGGGCCGCG GCCACGTTCC GGCAGTGGCG CCGCGAGGGC
GTGTTGGTGC GCGAAAAACA GCCGGCCCTC TACCTGTACG AACAGGAATT CAGTCTGCGC
GGGCGGACGT TGACCCGACG CGGTTTTTTT TGCGCCCTGT ATCTAGAGCC GTACAGCACC
GGGACGGTGC GCCCCCACGA GGAGACTATG GCCGGGGCCA AGCAGGACCG CCTGAACCTG
TTGCGCGCCT GCCGGGCGAA CTTCAGCCCC ATTTTCGGAC TGTACGCCGA AAAGGAACTG
ACGGCGGTGC AGACCCTGGT GGAGGCGGCC GCCCCCGAGC CCGCCGTCGA TTTCCGTGAT
GAGCAGGGGC AAACGCACCG GCTCTGGCCG GTCAGCGACC CCCGGGCAAT CAACAAGGTG
CTGTTCATCC TGGAACAGTA CCCCGTGTTT CTGGCCGACG GCCATCACCG GTACGAAACC
GCCCTGGCCT ACCGTGATGA AATCAGCGCC CCCGGTCTTC ACAACTCCGT GCTGATCGTG
CTGGTCAGCC TGTACGACCC CGGACTGGTA ATCCTCCCCA CCCACCGCCT GGTGAAGAGT
CCGCGGGGCC TGGAGGCGGC CGCCCTCCTG GCCGCGCTGG AGACCCACTT CGAGGTGCAC
CCGGTGGAAA CGGCCGATTT TAGGGCCTTT ATGACCGACC TGGAAGGCCG GCCGCGGTAT
ACTTTTGGGC TTTACACCGG GGCCGGCCGG TTGCACTTCG TAACCCTGAA GCCGGAACTG
GATCTGGAGC TCCTGATGCC GGCCGACCGC TCTTCTAACT GGCGGCGGCT GGAGGTGTCC
GTCCTGCACC ACCTGATCCT GGAGAAGCTC CTGGGCATCG GCGGCGCCGA GCGCGCCCAC
GGGGACTACC TTAAATACAC CCGGGAAGAG GAGGGCGCGC TTTCCCGGGT CGATGCCGGG
GAGTACGATT TCGCCTTCTT CCTGAACCCG CCCGGCGTCG AGGAACTGGT GGCCGTGGCC
GAGGACGGGG AACGCATGCC CCAGAAGTCC ACCTACTTCT ACCCGAAGCT CAGCGCCGGG
CTCGTGCTGA ACGCCTTCGA CTGA
|
|---|
| Protein sequence | MARILPIRGL RYNPAVVEDL SLVVTPPYDV IDEEAQNRYY ERHPHNIIRL EYNRIHPGDT
AADNRYTRAA ATFRQWRREG VLVREKQPAL YLYEQEFSLR GRTLTRRGFF CALYLEPYST
GTVRPHEETM AGAKQDRLNL LRACRANFSP IFGLYAEKEL TAVQTLVEAA APEPAVDFRD
EQGQTHRLWP VSDPRAINKV LFILEQYPVF LADGHHRYET ALAYRDEISA PGLHNSVLIV
LVSLYDPGLV ILPTHRLVKS PRGLEAAALL AALETHFEVH PVETADFRAF MTDLEGRPRY
TFGLYTGAGR LHFVTLKPEL DLELLMPADR SSNWRRLEVS VLHHLILEKL LGIGGAERAH
GDYLKYTREE EGALSRVDAG EYDFAFFLNP PGVEELVAVA EDGERMPQKS TYFYPKLSAG
LVLNAFD
|
|---|
| |