| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1625 |
|---|
| Symbol | |
|---|
| ID | 6026038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1713027 |
|---|
| End bp | 1713617 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641594448 |
|---|
| Product | imidazoleglycerol-phosphate dehydratase |
|---|
| Protein accession | YP_001717759 |
|---|
| Protein GI | 169831777 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0131] Imidazoleglycerol-phosphate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATCA GAAAGGCGGA AGTGCGCAGA CAAACCAGGG AGACCGAGAT CCGGGTGCAG
CTGCAGGTGG ACGGGACCGG GGAATACGCC CTGGACACCG GGGTGCCCTT CCTGGAGCAC
ATGCTGGCCC TGACGGCCAA GTTCAGCGGG TTTGACCTGC AGATCCGGGC GCGCGGCGAC
CTGGATGTCG ACGACCACCA CACGGTGGAG GACGTGGGGA TCTGTCTGGG TGAGGCCCTG
GTGAAGGCGT TGGGGGATAA AGCCGGGATC GGACGGTTCG GGCACGCGAT CGTGCCGATG
GACGACGCCC TGGCCCTGGT GGCCGTCGAC CTCAGCGGCC GGGGGTACCT GGCCTTTGAT
GTGCCGATGC CCTCCCCCCA GGTCGGCCGG TTCGACACCG AACTGGTGGA GGAATTTCTG
CGGGCCCTGG CTTACAACGG CCGATTCAAC CTGCACGTCC GCCTGCTGGC CGGGGCGAAC
ACCCACCACA TAATTGAGGC GGTCTTTAAG GGCCTGGGCG TGGCATTGGG GTCGGCGGCA
CGGATTAATG CCCAACGTGG GGTCCCCTCG ACCAAGGGGG TTATCAACTA A
|
|---|
| Protein sequence | MLIRKAEVRR QTRETEIRVQ LQVDGTGEYA LDTGVPFLEH MLALTAKFSG FDLQIRARGD
LDVDDHHTVE DVGICLGEAL VKALGDKAGI GRFGHAIVPM DDALALVAVD LSGRGYLAFD
VPMPSPQVGR FDTELVEEFL RALAYNGRFN LHVRLLAGAN THHIIEAVFK GLGVALGSAA
RINAQRGVPS TKGVIN
|
|---|
| |