Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1603 |
Symbol | |
ID | 6025960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1691219 |
End bp | 1692397 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641594426 |
Product | LL-diaminopimelate aminotransferase |
Protein accession | YP_001717737 |
Protein GI | 169831755 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03540] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0791506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTTTTG TGGAGGCCAA GCGGATCCGG AATCTGCCGC CCTACCTTTT CGCCCGGATC GAACAGTTGA TCGCCGACAA AAAGGCCCAG GGAGTGGATG TGATCAGCCT CGGAATCGGT GACCCCGACG TGCCGACTCC GGACCACATT ATCGAGGCGG CGGAGAAAGA ACTGAAAATC CCGGCAAACC ACCAGTACCC GAGTTCAGCC GGCATGCCCG CCTACCGGCG GGCGGTGGCG GACTGGTACG CGCGCCGTTT CGGGGTCGAA CTCGATCCCC AGCGGGAGGT GGTCTCCCTG ATCGGCTCGA AAGAGGGAAT CGCACACTTG CCCTGGTGCT TCGTGGACCC CGGGGATGTC GTGCTGGTGC CCGATCCGGG TTACCCGGTC TACGCCGGTG GTACCATCCT GGCCGGCGGG ATACCCCACC CGGTGCCGCT GACCGCCGGG AACGGTTTCC TGCCCGACTT GGCGGCGATT CCCGCGGAAA CCGCGCGCCG GGCCAAAGTG ATGTTCATCA ACTACCCGAA CAACCCCACC GGGGCGGTCG CCTCGAAGGA GTTTTTCGCC CGGGTGGTGG ACTTCGCCCG GGAATACGGC ATCCTGGTGT GCCACGACGC CGCCTACTCG GAGATCGCCT TCGACGGGTA CCGGCCGCCC AGTTTCCTGG AAGTCGCGGG GGCCCGGGAA GTGGGGATTG AGTTCCACTC GGTTTCCAAG ACCTACAACA TGACCGGCTG GCGGGCCGGG TGGGCGGCCG GGAACGCCGG TGCCGTGGAG GCCCTCGGCC GGCTGAAGTC CAACCTGGAC TCCGGGGTCT TCCAGGTGGT GCAGTACGCG GCCATCGCCG CGCTGAACGG GCCGCAGGAC GGAGTGCAGT CCCTCTGCGA AATGTACCGG GAGCGGCGTG ACCTGGTGGT GGACACGTTA AACGACCTGG GTTGGCGATT GACGAGGCCC CGGGCGACCT TTTACATTTG GGCGCCGGTA CCGGCCGGGC ACGACGCGTC GTCGTTCGCC GAAATGGTCC TGGAAAAAGC GGGAGTGGTT ATCACCCCCG GCACCGGCTA CGGTACGTAC GGAGAAGGCT ACTTCCGGAT TTCTCTGACG CTCCCGACTC CCCGGCTGGT GGAGGCGATG GAGCGGCTGC GCGGGTGCCT GGGCCGGGTT ACCTTTTAG
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Protein sequence | MSFVEAKRIR NLPPYLFARI EQLIADKKAQ GVDVISLGIG DPDVPTPDHI IEAAEKELKI PANHQYPSSA GMPAYRRAVA DWYARRFGVE LDPQREVVSL IGSKEGIAHL PWCFVDPGDV VLVPDPGYPV YAGGTILAGG IPHPVPLTAG NGFLPDLAAI PAETARRAKV MFINYPNNPT GAVASKEFFA RVVDFAREYG ILVCHDAAYS EIAFDGYRPP SFLEVAGARE VGIEFHSVSK TYNMTGWRAG WAAGNAGAVE ALGRLKSNLD SGVFQVVQYA AIAALNGPQD GVQSLCEMYR ERRDLVVDTL NDLGWRLTRP RATFYIWAPV PAGHDASSFA EMVLEKAGVV ITPGTGYGTY GEGYFRISLT LPTPRLVEAM ERLRGCLGRV TF
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