Gene Daud_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1593 
Symbol 
ID6026328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1682240 
End bp1682704 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID641594416 
Productpeptide deformylase 
Protein accessionYP_001717727 
Protein GI169831745 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGGTAT TCCAGATAGT CCAATATCCG GACCCGATCC TTCGGGAAAA GGCCCGCGAA 
GTCCGGAAGA TCACCCCGCA GATTGAACGA CTGGCGGTGA ACCTGGTGGA CACAATGCGC
CGGAGTGGGG GCGTGGGATT GGCCGCACCC CAGATCGGGG TGTCCAAACG GGTGATCGTG
GTCGAAGACC CTGAGAAGAA CCCGATCGTG CTCATCAATC CGGAAATCGT GAGGCTGGAG
GGCGACAAAG AAACGGCCGA GGAAGGCTGC CTGAGCGTTC CGGGAGTTTG GGGGCAGGTG
GAGCGCCGGA TGTGCCTGAC CGTGCGGGGG TATAACCTGG AGGGAAAACA GGTGGCGTAC
CTCGTTGAGG GGTTCACCGC CCGGGCCTTC CAGCACGAAA TCGACCACTT GGACGGGATC
GTGTTTCTGG ACCGGGCGAC TACGATATAC AAGAGAAAGG AATGA
 
Protein sequence
MAVFQIVQYP DPILREKARE VRKITPQIER LAVNLVDTMR RSGGVGLAAP QIGVSKRVIV 
VEDPEKNPIV LINPEIVRLE GDKETAEEGC LSVPGVWGQV ERRMCLTVRG YNLEGKQVAY
LVEGFTARAF QHEIDHLDGI VFLDRATTIY KRKE