Gene Daud_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1586 
Symbol 
ID6026189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp1674654 
End bp1675313 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID641594409 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001717720 
Protein GI169831738 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.134483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCAAAA TCGCACCTTC CATCCTATCG GCCGATTTCG GCCGGCTGGC GGAGGAGATC 
CGCAAGGTGG AGGAGGCGGG GGCCGACTAC CTGCACATCG ACGTGATGGA CGGGCATTTT 
GTGCCGAACA TCAGTATCGG GCCACCGGTG GTGGCTTCCC TGCGCCCGCA GAGCAGCCTG 
GTGTTCGATG TGCACCTGAT GATTGAAGCC CCGGAGCGTT ACGTGGCCGC GTTTGCAGAG 
GCCGGGGCCG ACATCCTAAC CGTGCACTTT GAGGCCGCCC GCCATCTGGA CCGCACCCTG 
CGCCTGATCC GGGAGCACGG GATGCGCGCC GGAGTGGCCC TGAACCCGGC CACACCCCCG 
GGTATGGTCG AGTACGTGCT TCCCCTGGTG GATCAGGTAC TGGTTATGAC GGTGAATCCG 
GGTTTCGGGG GCCAGAAATT CTTGCCCGAG GTTGTGCCCA AAATAGCCGG CCTGAGGCGG 
ATGGTGGAGC GACAGGGAGT CGGGACCGAC CTGGAGGTGG ACGGGGGGAT CGACCCGGAG 
ACGGCCCCGG CGGTCGTGCG GGCCGGGGCC AATGTGCTGG TGGCGGGATC AGCAGTATAT 
GGTGCTGCGG ACGCGGCAGC GATGGTGCAA CGGCTCAGGG CGGCCGGAGT CGGAAAGTGA
 
Protein sequence
MIKIAPSILS ADFGRLAEEI RKVEEAGADY LHIDVMDGHF VPNISIGPPV VASLRPQSSL 
VFDVHLMIEA PERYVAAFAE AGADILTVHF EAARHLDRTL RLIREHGMRA GVALNPATPP 
GMVEYVLPLV DQVLVMTVNP GFGGQKFLPE VVPKIAGLRR MVERQGVGTD LEVDGGIDPE 
TAPAVVRAGA NVLVAGSAVY GAADAAAMVQ RLRAAGVGK