| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1581 |
|---|
| Symbol | |
|---|
| ID | 6026380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1670343 |
|---|
| End bp | 1670993 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641594404 |
|---|
| Product | formate dehydrogenase |
|---|
| Protein accession | YP_001717715 |
|---|
| Protein GI | 169831733 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.300092 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TTAGCAGGCG GGCTTTCCTA AAATCCGTCG GTCTCGGCGC GGCGGGCCTG
ACGGCGCTGG ATATAATCGG CGGTGGGAAG TCCGCTGAAG CGGCGACGCT GCTTCTCAAG
TCGCGCACGG ACATGCCGGA GTTTAAGCTC CAGTACGCCG AAGAAACCTA CACCATTTGC
GGCTGGTGCT CCGGCGGGTG CGGCGCGATC ATCTACACCA AGGACGGAAA GGTAATCGAC
AGTATCGGCG ACCCCGACCA CCCGATCAAC GAGGGCGCGA TGTGCCCCAA GGGGCGCGCT
CTCTCCGACC TGCGGCACGT CGTCGGCCAA TCCGAACGCC GGCACTCCAT GTGGCCCAAC
CCCCGTATCG ACAACCCGCG GCGCCTGACC AAGCCCCTGT ACCGTGCGCC CTACAGCACG
GAATGGCAGG AAATCAGCTG GGACACGGCC ATCGCGGAGA TCGTCAAGCG GGTCAAGGCC
ACGCGGGACG CCACTTTCGA GACCACCGAC GCCAACGGCG TGACGGTGAA CCGCACGCAG
GCCATCGCCC AGTTTGGCAG CGCCACCATC AACAACGAGG AAAACTACCT GATGCAAAAG
TGGGCGCGCG CTCTGGGCCT CATCAACATC TGTTTCCACG CCCGTCTCTG A
|
|---|
| Protein sequence | MKKLSRRAFL KSVGLGAAGL TALDIIGGGK SAEAATLLLK SRTDMPEFKL QYAEETYTIC
GWCSGGCGAI IYTKDGKVID SIGDPDHPIN EGAMCPKGRA LSDLRHVVGQ SERRHSMWPN
PRIDNPRRLT KPLYRAPYST EWQEISWDTA IAEIVKRVKA TRDATFETTD ANGVTVNRTQ
AIAQFGSATI NNEENYLMQK WARALGLINI CFHARL
|
|---|
| |