Gene Daud_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1567 
Symbol 
ID6027554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1653246 
End bp1653956 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content61% 
IMG OID641594390 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001717701 
Protein GI169831719 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATCG CCGCCAACCT CTCAGGTCTT TGGAGAAACT ATGCTGAGCG CGCCGCCGTG 
CCCGGTTGCA GCGACCTTAC TCCGGAACTG GTCGAACAGT GCAACACCAA GCCGTCCGAG
GATTTGTCGC TGTATGAACT GGTCTATTCG GTGATTGACA CCGAGACTAC CGGGTTGCGG
CCCGATGCTG GGGACGAGGT GATTTCGGTC GCCTGTGTCC GGGTGGTAAG CGCCAAAATC
CAGAACGATT ACTTCTACAC CCTGGTCGAC CCTGAGCGCG AGGTGCCGGA ACTGGCGGCC
ACTATTACGG GGATCACCAC GGAGAGAGTC CAGGGGCAGC CGGTGCTTGA AAAGGTGCTG
CCCCGGATGC TGCGGGAAAT GGCCGGGGGT GTGATCACCG GGTTTAACAT CCAGTTTGAC
CTAGTGTTTC TGAACAACGG GCTGAAAAGG AAGTGCGGCA CCACCCTTAA CCCCCCGATG
GTGCTGGACG TCCTGTCTTT ATGCCGGATC CTGAAGCCAC GCGCCCGGAC CTTTGGTCTC
GGGGCGATGG CCCGGGAGTA CCAGATTTCG GTGAAGGACC GGCACAACGC CCTCGGTGAC
GCCCTGATCA CGGCACGGTT GCTGCTTTGC CTGCTCCCGG AACTGGAGGC GCGAGGGGTC
CGGACCCTGC GGGACCTGCG CCACTTTCTC CGCTACCACG CGTTCTACTA G
 
Protein sequence
MSIAANLSGL WRNYAERAAV PGCSDLTPEL VEQCNTKPSE DLSLYELVYS VIDTETTGLR 
PDAGDEVISV ACVRVVSAKI QNDYFYTLVD PEREVPELAA TITGITTERV QGQPVLEKVL
PRMLREMAGG VITGFNIQFD LVFLNNGLKR KCGTTLNPPM VLDVLSLCRI LKPRARTFGL
GAMAREYQIS VKDRHNALGD ALITARLLLC LLPELEARGV RTLRDLRHFL RYHAFY