Gene Daud_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1563 
Symbol 
ID6025496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1648000 
End bp1649565 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content62% 
IMG OID641594386 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_001717697 
Protein GI169831715 
COG category[C] Energy production and conversion 
COG ID[COG1866] Phosphoenolpyruvate carboxykinase (ATP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGTT TTCGTCGCCC CGTGGAGGCA CGTACTATCA TCGACAACCC CCCGGTCACC 
GCGCTCCGGG AAATGACCCA CGACGGACAG AACACGGAAT ACGGCAGTGT GAACTACCTC
ACCCGGGTAC GCAACCGCAG TGCCAAGCAG ACTTACATCG TGGAGGACGG GGTCCAACTC
GGCGCGGACC AGCAGGGGAT CTCCCTGGAG AAGGCCGAAG CCGTCGCGTC GGAGGTTCAC
CGCTATCTTC GGAATCGGAC GCTGATCCGG CTGGACCGCC AGATAGGTCG TCACCCGGAC
TTCAGTCTCC ACTGCCGCTT TTACGTATCC GCGGAATATG CCCGGATTCC GCTGCAGTGG
CATAATATGC TCTTTGAGCC TGTTGACCGG GACGCCGAAC CGGACCTGGT GTCCATCCAG
ATTCCCGAGT GGCCGGAGAA AATCATCTTC TGCCATCCGC TCGCCGGCGT CACGTACATC
CTGGGCAGCG ATTATTTCGG AGAATGCAAG AAGTCTTTCC TGCGCAAGGC GATGTATCTC
GCCAAGAAGC GCGGCTTCCT GGGTTTCCAT GCGGGCAGCA AGGTGCTGAA GGTTCGGGAC
CGGCACGGCG TGTTGAAGAA GGTCGGCTTT ATCCTTTTCG GCCTGAGCGG CACCGGCAAA
ACCACCCTCA CCATGCACAA CCACGGGCTC ACCGGCGGGG AGGACGTGGC CATCCGTCAA
GACGACGTCC TGATCATGAA CCCCGCTGGT TACTGCTACG GCACGGAAAA CGGCTTCTAC
ATCAAGACCG AGGGGCTGGA CGCCTCCCAG TGCGTCCTTT ATCGGGCCGC CACCTCACCC
AACGCCATAT TTGAAAATGT CTGCGTCGAC GGCCGGGGTC ACATCCTGTT TGACAACTGC
GAGCTGACTT CGAACGGTCG CGGCGTGATC CTGCGTTCCG ACGTTCTGGG CACCGACGAC
AAGATCGACC TGGACAAGGT GCACCGCATC ATCTTCATCA CCAGGCGCGA CGACGTGGTG
CCCGCGGTCG CCCGTTTGAA CGCCGAACAG GCCGCCGCCT ACTTCATGCT CGGAGAGTCC
ATCGAAACCT CGGCCGGGGA CCCCACCAAA GCAGGGGAAC CCAAACGGGA AGTGGGGACC
AACCCCTTCA TCATCGGACC CGAAAGCGAG GAAGGCAACC GGCTGCTCGA AATCCTCAAA
GCCAACCCGG ACATTGAGTG CTACATCCTG AACACCGGCA GCGTGGGCAA GCGTGAAGGC
GATCCCGGGA CGAACATCAC CGTGCGCCAT TCGGCTCACC TTATGACTCA GATCGCCCGT
GGGAGCATCA AGTGGACCTC CGACCCGGAC TGGGGCTACC TGATTCCCAC CGAGGTCCCG
GGAATGAATA TCCGCCCGTT CGACCCGCGG CTTTACTACT CCACCGAGGA GTATGCCCGG
CGGGTGGACC GCCTGCGCGA GGAACGGCGC GCCTGGCTGG CCCGCTACCC GAACCTGAAA
CCGTCCATCC TAAAGGCCGT CGAACCGCCG CGGGTGCTGG CCACGGCCGC CTCCGCCGGG
GACTGA
 
Protein sequence
MHRFRRPVEA RTIIDNPPVT ALREMTHDGQ NTEYGSVNYL TRVRNRSAKQ TYIVEDGVQL 
GADQQGISLE KAEAVASEVH RYLRNRTLIR LDRQIGRHPD FSLHCRFYVS AEYARIPLQW
HNMLFEPVDR DAEPDLVSIQ IPEWPEKIIF CHPLAGVTYI LGSDYFGECK KSFLRKAMYL
AKKRGFLGFH AGSKVLKVRD RHGVLKKVGF ILFGLSGTGK TTLTMHNHGL TGGEDVAIRQ
DDVLIMNPAG YCYGTENGFY IKTEGLDASQ CVLYRAATSP NAIFENVCVD GRGHILFDNC
ELTSNGRGVI LRSDVLGTDD KIDLDKVHRI IFITRRDDVV PAVARLNAEQ AAAYFMLGES
IETSAGDPTK AGEPKREVGT NPFIIGPESE EGNRLLEILK ANPDIECYIL NTGSVGKREG
DPGTNITVRH SAHLMTQIAR GSIKWTSDPD WGYLIPTEVP GMNIRPFDPR LYYSTEEYAR
RVDRLREERR AWLARYPNLK PSILKAVEPP RVLATAASAG D