| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1560 |
|---|
| Symbol | |
|---|
| ID | 6027081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1644807 |
|---|
| End bp | 1645247 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641594383 |
|---|
| Product | putative CheW protein |
|---|
| Protein accession | YP_001717694 |
|---|
| Protein GI | 169831712 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.918027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGTCCA CCGTTGCAAA CGAGCAACTG GTGATCTTCG ACCTGAGTGG GCAGAAGTAC
GCGATTCCGG TGCTGAATAC CCAGGAGATC ATCAAGATGA TCGATATTAC TCCGATTCCC
AGGGCCGATA GCTATATTGA AGGTGTCATC AACCTGCGGG GTCGGATAGT CCCTATTATT
AACCTCAACA AGCGGCTGGA CCTCGCCCGA AGTGAGACGA CCCGGGATAC CCGGATCATT
GTGGTGGAGC ACAAGGAGAC CAGCGTCGGC ATGATCGTGG ACCGGGTCCA GGAGGTGGGC
CGCTACAACC CGGACGAGAT CGAAAGGCCG GAATCGGTGA TGAAAGAAAA CGAGTTCGTC
AGCGGGGTGG TCAAGAAGGA GAACGCGTTG TGGCTCTTGC TGCAGCTCGA TAAGGTACTC
CCCAACATTT CGGTGTCCTG A
|
|---|
| Protein sequence | MASTVANEQL VIFDLSGQKY AIPVLNTQEI IKMIDITPIP RADSYIEGVI NLRGRIVPII
NLNKRLDLAR SETTRDTRII VVEHKETSVG MIVDRVQEVG RYNPDEIERP ESVMKENEFV
SGVVKKENAL WLLLQLDKVL PNISVS
|
|---|
| |