Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1540 |
Symbol | |
ID | 6025410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1622827 |
End bp | 1623561 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641594364 |
Product | ABC transporter related |
Protein accession | YP_001717675 |
Protein GI | 169831693 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00440464 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGCGACG TGGTGCTGAT GATGGACAAC ATCAGCAAGA ATTACGGGCC GCGTGAGGTA TTGCGCGTGG AGCGGCTGTC CTTTGCCGCG GGCCGGATTC ACGGCGTGAT GGGGCCGAGC GGCGCCGGGA AAAGCACGAT GCTGCGGCTG CTGAACTTGC TGGAGCAGCC GACGACCGGC CGGATTTTCT ACCGCGGACA GGATGTACAC GCCTACCGTC CGCGGTTGCA GTTGCAGCGC CGGATGGCCA TGGTGTTTCA AAAACCGGTG CTCTTCGATG GAACGGTGTT CGACAACGTG GCTTACGGCC TGCGGGTGCG GGGCATGCGC GGGCCGGACG TGAGCGGCAG GGTGGTTGAC GCCTTGCGGT GGATGGGACT TGAGCCGCTG CGCCGGGCGC GGGCGCTTAC CCTGTCCGGC GGGGAGGCCC AGCGCGTGGC CCTGGCCCGG GCGCTGGTGC TGGAACCGGA CGTGCTGCTG CTGGACGAAC CCACTACGAA CCTGGATCCA AACAACGTGG CGCTCCTGGA GAAGCTGATC CGGGAGGCCA GCGGCCGAAA CGGCACAGCG GTGATCCTGG TTACGCACAA CGTGTTCCAG GCGAAGCGCC TGGCGGACCA GGTGATCTTC CTCTATGAGG GGCGGGTGGT GGAAGAGGGA CCGGCGGCGG AAATGTTCCG AGCCCCCAAG GACGAGCGGA CCAGAGCCTT TGTCCACGGC GAAATGATCT ATTGA
|
Protein sequence | MSDVVLMMDN ISKNYGPREV LRVERLSFAA GRIHGVMGPS GAGKSTMLRL LNLLEQPTTG RIFYRGQDVH AYRPRLQLQR RMAMVFQKPV LFDGTVFDNV AYGLRVRGMR GPDVSGRVVD ALRWMGLEPL RRARALTLSG GEAQRVALAR ALVLEPDVLL LDEPTTNLDP NNVALLEKLI REASGRNGTA VILVTHNVFQ AKRLADQVIF LYEGRVVEEG PAAEMFRAPK DERTRAFVHG EMIY
|
| |