Gene Daud_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1508 
Symbol 
ID6026253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1591175 
End bp1591996 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID641594332 
Productglutamate racemase 
Protein accessionYP_001717646 
Protein GI169831664 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAAAGG GCACGGTCGG CCTGTTTGAT TCCGGGGTGG GGGGACTGAC GGTTGTCCGG 
GAAGTATCCG TTATCCTGCC GGGAAAGCGC GTGATTTACT TTGGTGACAC CGCTCACGTT
CCATACGGGG ACAAAAGTGT GGACGAGCTG TTGTCCTACG CCGAACGGAT CATCGGTTTT
CTTTGCAGTC AAGGGGCAGA TTACATCATT TTCGCGTGCA ACACCAGTTC CGCCGTTTCA
CTCCGGCTAA TGCGCGACCG TTTCCAGGTG CCGATGATCG GCCTGATCGA GCCCGGAGCG
GCCGAGGCTG TCCGGCTGTC GGCGACCGGC AGAATCGGCC TGATTGCCAC CGAGGCGACC
GTGAAAGCGG GCGCCTATGC CCGGGCGGTG TCGGCGCTGA ATCGGAATTG CCAAGTGTTC
AGCCAGGCTG CGCCGCGCTT GGTGCCCCTG GTCGAGTCCG GGGAGTCCGA TACTCCCAAG
GCCGAACAAG CGGTGCGTGA ATACCTGGAG CCCCTGCGAG AGCAAGGTAT CGACACCCTG
ATCCTGGGTT GCACCCATTA CCCGTTCCTG CGGGACGTGA TCGAGCGGGT GCTTGGTCCG
GAGGTGGTGC TCGTGGACCC GGCGGCCGCT ACCGTGCGGG CCGCGCGGCT TGATATGCTC
CGGCGGGGTT TTTCTGCAGA CAACCCGGGT GCGCAGGGGG AGCAGGACAC GGTTTCGCTC
CGCTACTTCG TGAGCGGGAG CGCCGACGCT TTCCGGGCGG TGGCCGGACA ATTCCTGGGT
CGGGAGCCGG AGCCGGTTAC CGAAATCTGT CTTCTCAGGT GA
 
Protein sequence
MAKGTVGLFD SGVGGLTVVR EVSVILPGKR VIYFGDTAHV PYGDKSVDEL LSYAERIIGF 
LCSQGADYII FACNTSSAVS LRLMRDRFQV PMIGLIEPGA AEAVRLSATG RIGLIATEAT
VKAGAYARAV SALNRNCQVF SQAAPRLVPL VESGESDTPK AEQAVREYLE PLREQGIDTL
ILGCTHYPFL RDVIERVLGP EVVLVDPAAA TVRAARLDML RRGFSADNPG AQGEQDTVSL
RYFVSGSADA FRAVAGQFLG REPEPVTEIC LLR