| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1492 |
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| Symbol | |
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| ID | 6026559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1575230 |
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| End bp | 1577491 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641594314 |
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| Product | AAA family ATPase, CDC48 subfamily protein |
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| Protein accession | YP_001717630 |
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| Protein GI | 169831648 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGAAA AGGTGGGGTG GGGAAAACTG TTTAAGGAAG AGTCGATAAG AATGGATACT
GGATCTACCG GTTTGTTTTT GCGGGTATTA GAAGCTTTAA CAAAAGATGT GGGTAGGGGA
ATTGCCAGGC TTGACCCCCG TGACATGGAA AGGATCAATG TTTCTGTCGG CGATGTAATT
GAAATCAAAG GTAATAAAAG AACTGTGGCC AAAGTAATGC CCGCTTACAT GGAACAGCGG
GGTAAAAATG TTATCCAAAT CGATGGTATT ATCCGGGAAA ATGCACGGGC CGGGTTAGGT
GACAAGGTAC AAATTCAAAA AATACCGTTT GATAACGCTT CGACCATAAT CCTAGCTCCT
ATTAATGCTT ACCGTGCTGT ACCCAAAGAT AAGGACGGCA GATACATCGG TAAGTTAATG
GAAGGTTTTC CCCTCCTGAA AGGTGATAAA GTCAGAATAA ATCTTTTTGG CTCCCGCACC
CAAGAATTTA CTGTTGTAGA GACCATTCCG AAAGATGTGG TGCTGGTTCA TACCGATACT
ATCGTTAAGG TGAAGTCGCA GGAGGTAACC GGTAAAAAAC AATCTCTAAT AACATATGAG
GATATCGGGG GATTACAAAA GGGAATTCAA AGAATACGGG AAATGATTGA ACTACCGCTG
AAGTACCCCG AAATTTTTGC CAGACTGGGG ATTGAGGCGC CAAAGGGGGT ATTGCTCCAC
GGTCCCCCGG GTACAGGCAA AACATTAATT GCCAGAGCGG TAGCCAATGA AACCGATGCC
CATTTTTTCC ATGTTAACGG CCCGGAAATT ATTCACAAGT TTTACGGGGA AAGTGAGGCA
AATCTCCGGG GGATTTTTGA AGAGGCTGGT AAAAATGCGC CCAGTATTAT TTTCCTGGAT
GAAATAGATG CCATCGCTCC CAAGCGGGAA TCGGTCGTTG GCGAAGTGGA AAAACGGGTT
GTGGCGCAAC TGCTGGGGTT GATGGACGGT CTGGAATCGA GGGGCCAGGT GATTGTCATC
GGGGCCACCA ATATTCCCAA TTCCCTGGAC CCCGCGCTCA GGCGGCCGGG CCGTTTTGAC
CGGGAGATTA CCGTTAACAT TCCCGATAAA AAGAGCAGGT TGGAAATCTT GCAAATTCAT
ACCCGCGGTA TGCCCCTGTC AAAAGATGTG CATCTGGAAA AAATTGCAGA AATTACCCAT
GGTTACGTGG GAGCAGACCT GGCGGCTTTG TGTAAAGAGG CGGCCATGGC CTGTTTAAGA
AAAGTGTTTC CTCAAATAGA CCTCCGGAGT AATTATCTTT CATATGAAGT CCTTATGGAG
TTGGAGGTAA CCATGGCGGA TTTTTCTGAG GCTTTTAAAG ATGTGGAACC TTCCGCCATC
CGGGAGGTTT TCGTGGAGGT ACCGGATGTC CGGTGGAGTG ATATTGGCGG CCTAGACAAA
GTTAAACAGG AACTAAAGGA AGCGGTGGAA TGGCCTATAA AACATCCCGG GTTATTTACT
TATGTAAAAA CCAACCCTCC CAAAGGTATT CTTTTACACG GTAGCCCCGG TACGGGAAAA
ACCTTAATTG CCAAAGCGGT GGCCAATGAA AGTGGAGTAA ATTTCATTTC AGTAAAAGGG
CCCGCCCTGC TCTCTAAATG GGTCGGAGAG TCAGAAAAAG GTGTACGGGA AGTATTCAAG
AAAGCAAAAC AAGCGGCACC GTGTATTGTT TTCTTTGATG AAATAGATGC TTTAGTCCCT
GTCAGGGGAA CCGGGGGTGG AGATGCTCAT GTTGCGGAGC GGGTGCTCAG CCAGCTCCTG
ACCGAAATGG ATGGGGTTGA AGAATTGAAG GGAGTGGTAG TGTTGGCCGC CACTAACCGA
CTGGAACTAA TTGACCCGGC GCTGCTAAGA CCCGGAAGAT TTGACCTCCT GCTCGAGTTG
CCTGTTCCCG GCGAAGACGA GCGTCTGGCG ATATTACAGA TCCATACCAA CGGCAAGCCG
CTGGCCGAAG ACGTGGACCT GGTTAATTTG GCCATCATAA CCGATGGTTC CACCGGCGCC
GATATCCAGG CTATCTGCAA CAGGGCTTCT TTGCTGGCGA TTAGAGAATT TTTGGACAGT
AGTCAAAATG ATAAAGATCC CGATTACTCC CGGCTTCAGA TTGCGGCGAA GCATTTTGAT
GCGGCCCTGG AAGAAGTAAG AAGACCGGAA CCGGCCCAAA TAGAAGATCA AAAACCCCGG
GTTCTGACCA TGAAAAAAGA TCCCGAAGAA TGCTCCTCGT AA
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| Protein sequence | MAEKVGWGKL FKEESIRMDT GSTGLFLRVL EALTKDVGRG IARLDPRDME RINVSVGDVI
EIKGNKRTVA KVMPAYMEQR GKNVIQIDGI IRENARAGLG DKVQIQKIPF DNASTIILAP
INAYRAVPKD KDGRYIGKLM EGFPLLKGDK VRINLFGSRT QEFTVVETIP KDVVLVHTDT
IVKVKSQEVT GKKQSLITYE DIGGLQKGIQ RIREMIELPL KYPEIFARLG IEAPKGVLLH
GPPGTGKTLI ARAVANETDA HFFHVNGPEI IHKFYGESEA NLRGIFEEAG KNAPSIIFLD
EIDAIAPKRE SVVGEVEKRV VAQLLGLMDG LESRGQVIVI GATNIPNSLD PALRRPGRFD
REITVNIPDK KSRLEILQIH TRGMPLSKDV HLEKIAEITH GYVGADLAAL CKEAAMACLR
KVFPQIDLRS NYLSYEVLME LEVTMADFSE AFKDVEPSAI REVFVEVPDV RWSDIGGLDK
VKQELKEAVE WPIKHPGLFT YVKTNPPKGI LLHGSPGTGK TLIAKAVANE SGVNFISVKG
PALLSKWVGE SEKGVREVFK KAKQAAPCIV FFDEIDALVP VRGTGGGDAH VAERVLSQLL
TEMDGVEELK GVVVLAATNR LELIDPALLR PGRFDLLLEL PVPGEDERLA ILQIHTNGKP
LAEDVDLVNL AIITDGSTGA DIQAICNRAS LLAIREFLDS SQNDKDPDYS RLQIAAKHFD
AALEEVRRPE PAQIEDQKPR VLTMKKDPEE CSS
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