| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1440 |
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| Symbol | |
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| ID | 6026280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1522349 |
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| End bp | 1523761 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641594259 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001717579 |
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| Protein GI | 169831597 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACGA TCACGATCGC AGAGATTAGG GCTGTGACCG GGGCCGAGAT AATTCAGGGG
GAGCCGTCCG CCCGGGTGAA GCGGGTGACG ACCGACACCA GAGTGCTTGC CGGCGGCGAA
CTGTTTGTCG CGCTGCGGGG TTCCCGATTC GACGGGCACG ATTTCGCTGG GCAGGCGGTG
GACCGCGGGG CTTGCGGGCT GCTGGTCAGC CGGGAGGTGT CTGTTCCCTC CGGCGTCGCC
GTGCTGAAAG TCGCCGACAC GCTGACGGCG CTGCAGGCGC TGGCGCTGGA CAACCGGCGG
CGCTGCGGCC TCCCGGTGAT TGCCGTCACC GGCAGCACGG GGAAAACCAC CACCAAGGAT
CTGCTGACGG CCGTGCTTGC GGCCCGCTTT CGGGTCTTGG CCACCCGCGA GAACCTGAAC
AACGAGATCG GCCTGCCCTT GACGCTCCTG GATGTAGACC CCGTTCACGA GGTGGCGGTG
GTCGAGCTCG GAATGCGGGC TCCGGGCGAA ATCGATCTCC TGGCCCGGAT TTGTGAGCCT
ACGGGAGGCG TGATCACCAA CATCGGCGAG ACCCACCTGG AACTCCTGGG CTCGGTGGCG
AATATCGCCC GGGCCAAGGG AGAGCTTCTG GACCATATTC CCCCTTCCGG GTTCGCCGTA
CTGCACGCCG AGAGCCCTGG AATGGATGAG CAGGCCCGAC GGTGCCGGGG GCGGGTGGTG
CGCTTTGGGG AATCTGAATC CGCCGACTTC CGGCTTCTTG ACTACCGTGC CCTACCGGAC
GGCTCTGTCT TCCGGGTGCG GTCCGCGGGG GGGGACGAAG AGTACTATCT GCCGCTTTTC
GGCCGACACA CGGCGCTGAA CGCCCTGGCG GCGATCGCGG TCGGGTTGGA ACTGGGCCTG
GCGGTGAGTG AAATCCGCGC CGGTTTGGAG CAGGCCCGCG CTTCATCCCT GCGGCAGGCC
ATTGTTAAGG CCGGCGGTCT GACTATTATC AACGACACTT ACAATGCCAG CCCCGCTTCG
GTCAAGGCTG CGCTCGAGGT TCTAGCCGAG ATTGCCGCTG GGCGATCTAC GGTGGCGATC
CTCGGCGGCA TGCTGGAGTT GGGCCCGCGT TCTTCGGAAG CGCACCGGGA GGTAGGGATG
GCCTGTGCCC ACGCCGGTGT AGGTCAACTG GTGACGATGG GTGAGTTGGC GGTGGGAATC
GCTGACGGCG CCCGTGAAGC CGGGTTGCCT GCCTCCCGGA TCTGGGCATG CCACACACTT
GAAGAAACCG TTGACACCGC CCGCCGGTTG GCGGGGGAAA ACGTGGTGAT TTTAGTCAAA
GGCTCACGCG CGTTCCAGAT GGAGCGGATT GTGAAAGGTC TTGCGGAAGC GGCCACGCCG
GCCGCGGGCG GTACGAGGAG GGACGGTCGT TGA
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| Protein sequence | MRTITIAEIR AVTGAEIIQG EPSARVKRVT TDTRVLAGGE LFVALRGSRF DGHDFAGQAV
DRGACGLLVS REVSVPSGVA VLKVADTLTA LQALALDNRR RCGLPVIAVT GSTGKTTTKD
LLTAVLAARF RVLATRENLN NEIGLPLTLL DVDPVHEVAV VELGMRAPGE IDLLARICEP
TGGVITNIGE THLELLGSVA NIARAKGELL DHIPPSGFAV LHAESPGMDE QARRCRGRVV
RFGESESADF RLLDYRALPD GSVFRVRSAG GDEEYYLPLF GRHTALNALA AIAVGLELGL
AVSEIRAGLE QARASSLRQA IVKAGGLTII NDTYNASPAS VKAALEVLAE IAAGRSTVAI
LGGMLELGPR SSEAHREVGM ACAHAGVGQL VTMGELAVGI ADGAREAGLP ASRIWACHTL
EETVDTARRL AGENVVILVK GSRAFQMERI VKGLAEAATP AAGGTRRDGR
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