| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1421 |
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| Symbol | |
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| ID | 6026309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1504264 |
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| End bp | 1505838 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641594240 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001717560 |
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| Protein GI | 169831578 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTCTGA CTTTCTACGG TGCCACCGAC ACGGTTACCG GGTCCTGTTT CCTGCTGGAC
ACGGGCAAGC TGCGGCTCCT GGTGGACTGC GGCTTGTTCC AGGGCCGCAA GGAAATTCGA
AAAAGAAACT ACGAACCGTT CCCCTTCGCC CCGGACAGTA TCAATCTGGT ACTGTTGACC
CACGCCCACA TCGACCACAG CGGACTTTTG CCGAAACTCG TCAAGCACGG GTTCCGCGGC
CGCATCCTGG CCACCAGGTG TACCGTGGAA CTGTGCCGCG TGCTGTTGCC GGACAGCGGC
TCTATCCAGG AATCAGAGGT GGCCTTCAAA AACCGAAAGG CCAAACGGTC GGGGCAGCCC
CAGCTCTCAC CGATTTACAC CGAGGACGAC GCCTACAGGT GCCTCGAGTA CTTCGCGCCG
GTCGACTACG ACCGGACGAT CACTCTGGCC GACGGTGTGG ACTGCTGTTT CCGCGATGCC
GGCCACATCC TGGGCAGTGC CCTGATCCAG GTCCGGGTCG CCGGACCAGC GGGGGAAACC
AAGCTTGTTT TCTCCGGTGA TCTGGGGAAT CAGGGCAAGC CGTTTGTTCG CAATCCAACC
AGCGTGTTGG ATGCCGATTA CCTGGTCATG GAATCGACCT ACGGGGACCG GATGCACCTG
CCCAGCGAGG AGGCGGGCCG GGAAGCCCTG AAGAGGGCGA TCTGGAATAC GTACAACAAG
GGCGGCAACC TGTTGATTCC CGCCTTCGCC GTGGAGCGCA CCCAAGACCT TATCTACTAT
ATTTTTACCT TGGACCGGAA CGGGGAACTG CCGCCGGTGG ACGTCTGGCT GGACAGTCCC
CTGGCCGTGG CCATTACCCG GGTTTTCGGC CGGTATCCGC AATGCTTCGA CGAGGAAACG
AGTAATCTCG TAGCCAGCGG GATCGATCCC CTGGGCGCGC CGCACCTGAA GTTAGCCCGG
ACGGTGGAAG AGTCCCGGGC CCTGAACGAG TCGCCCGGTC CGAACATCAT CATCGCTGGC
AGCGGCATGT GTGACGGCGG CCGGATCAGG CACCACTTGA AACACAACCT CTGGCGTCCG
GAATCCACCG TTTTGTTTGT AGGATATCAG GCCGAGGGCA CCCTGGGCCG GTACCTGGTG
GAAGGGGCGC AGAGGGTAAG GCTCTTTGGT GAGGACATCA TGGTCAAGGC CGACATCGTG
AACGTGAACG GGTTCTCGGC CCACGCCGAC CAGAAAATGC TTTTGGAGTG GGTGGCCAAA
TTCCAAGTGC GCCCGCGCCG GATCTTCCTG GTGCACGGGG AAGCCAACGC CGTCGCGGCG
TTGCAGGAAT TGTTGGGGAT GGCCGGGTTT GAGGCTTACC GGCCCGGATG GCAGGAGACG
GTCATTCTGG GTCCGGGGCG GACGGTGGAG GAAAGGCTGT GGCAGGTGTT TTCCGGCTTG
CGCACCCGGA CGGAAGCGTA TCTGAAGATG CATCCCGAAC CGGAGGCATA CAACCGCGTG
TTACAGAAAC TGGTTGCCCT GGATGCCGAT CTGGCCGGCG GTGCGGGGGA CGAAAATGGA
CGAAGCGAAA GCTAG
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| Protein sequence | MRLTFYGATD TVTGSCFLLD TGKLRLLVDC GLFQGRKEIR KRNYEPFPFA PDSINLVLLT
HAHIDHSGLL PKLVKHGFRG RILATRCTVE LCRVLLPDSG SIQESEVAFK NRKAKRSGQP
QLSPIYTEDD AYRCLEYFAP VDYDRTITLA DGVDCCFRDA GHILGSALIQ VRVAGPAGET
KLVFSGDLGN QGKPFVRNPT SVLDADYLVM ESTYGDRMHL PSEEAGREAL KRAIWNTYNK
GGNLLIPAFA VERTQDLIYY IFTLDRNGEL PPVDVWLDSP LAVAITRVFG RYPQCFDEET
SNLVASGIDP LGAPHLKLAR TVEESRALNE SPGPNIIIAG SGMCDGGRIR HHLKHNLWRP
ESTVLFVGYQ AEGTLGRYLV EGAQRVRLFG EDIMVKADIV NVNGFSAHAD QKMLLEWVAK
FQVRPRRIFL VHGEANAVAA LQELLGMAGF EAYRPGWQET VILGPGRTVE ERLWQVFSGL
RTRTEAYLKM HPEPEAYNRV LQKLVALDAD LAGGAGDENG RSES
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