| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1399 |
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| Symbol | |
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| ID | 6026377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1483441 |
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| End bp | 1484196 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641594220 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001717540 |
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| Protein GI | 169831558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTATTT ACGTCGTCAG TTCCCGCAAC TTGAAGCGGA ACCTGATTGT GGCCGCCGTG
CTGGTGCTTG CGGCCGCAGC TTTCACCTCG GTCATGGTGC GCCAACCTAT GGCTGTCGTG
CCCACGCTCA CCGAGCACTC CGGTATCGTT TACAAGGTCA AAACCGGGGA CCCGGTAGTG
GCGCTCACCT TCGATATCAG TTGGGGCGAG AAGGTGCCGC AGCAGGTGCT GGACATCTTG
AAACAGGAGG ACGTCAAGTG TACTTTTTTC CTGTCCGGCC CCTGGGCCGT TAAACACCCC
GAAATCGCCA GGCGGATTGC GGACGACGGG CACGAGGTCG GCAGCCATGG CTGGCGGCAC
GTAAATTACA GCACTTTTTC GGATGAGGTG ATTAAGGAGG AGATCGCCAA GGCCCACAAG
GCGCTCGAGG AAACGACCGG GCGCACGCCC GCCCTCATCC GGACCCCGAA CGGCGACTGG
AACGAGCGGG TGGTCAAGGC CGTCTCCGAA GCCGGCTACC GGGCAATCCA GTGGAGTGTT
GATTCGCTGG ACTGGAAGGA CATCGGAGCG CAGGCGAGCA CCAAACGGGT GCTGGACCGG
GTTGAACCGG GGGCGGTCAT TCTGATGCAC GCCAGCGACA GCGCCGAACA GACTCCCGAC
TCGCTCCCGG GCATTATCAA GGGTTTGAAG GAAAAGGGCT ACACGCTGGT CACCGTTTCG
GAATTACTGA AACACGGCCG CGGCGTGGCC GAATAG
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| Protein sequence | MRIYVVSSRN LKRNLIVAAV LVLAAAAFTS VMVRQPMAVV PTLTEHSGIV YKVKTGDPVV
ALTFDISWGE KVPQQVLDIL KQEDVKCTFF LSGPWAVKHP EIARRIADDG HEVGSHGWRH
VNYSTFSDEV IKEEIAKAHK ALEETTGRTP ALIRTPNGDW NERVVKAVSE AGYRAIQWSV
DSLDWKDIGA QASTKRVLDR VEPGAVILMH ASDSAEQTPD SLPGIIKGLK EKGYTLVTVS
ELLKHGRGVA E
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