Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1393 |
Symbol | |
ID | 6026201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1475632 |
End bp | 1477791 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641594213 |
Product | RecD/TraA family helicase |
Protein accession | YP_001717534 |
Protein GI | 169831552 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGTAA TCCACGGTTA TCTGGAACGA ATTACTTATT ACAACGAAGA AAACCACTTC ACGGTCGCCC GGCTCCAGGA AACCGGGAAA AGGGAACTGA CCACGATCGT GGGTAACCTG GCCGGGATCA CCCCCGGGGA GTCTCTGAAA CTGACCGGGA AGTGGGTGCA AGACCCCAGG TTCGGACCAC AGTTCCGGGT CGAGAGATTC GAGACGGTGG TTCCGGCCAC AGTCAACGGC ATTCGGAAGT ACCTGGGTTC CGGACTGATC AGGGGCATCG GTCCGGTGAT GGCCAAACGA ATCGTCAAGG TTTTCGGGTT GCAGACACTG GACGTAATCG ACCGCTCTCC CGGCCGGCTT ACCGAGGTGG ACGGCATCGG CCCGAAGCGA GTGGAACTCA TCACCAGGGC CTGGGCGGAC CAGAAGGAAA TCCGGGGAAT CATGATTTTC CTCCAGGACC ACGGGATCAG TGCCGCCTAC GCCGCCAAAA TATACAGGCA GTACGGGAAC GCGTCGGTCG AGATTGTCAG AACAAATCCC TACCGCCTTG CCGCCGACGT GCACGGGATC GGCTTTGTCA CCGCCGACCG GATCGCGAGG CAGGTGGGTA TCGACCCGAA TTCCGTCACG CGGGCCGAGG AGGGAACCCT TTACGTTCTG AACGAGAGCA CTTCCGAAGG TCACGTCTAC CTCCCCTACG AAACGCTCGT GAGCCGGGCG GCGGAAATGC TCGAGGTCAG CCGGGATCTC GTGGTCGAGG CCGTGGAGCG GCTGGCTGCG GACCGGCGCG TAGTGCGGGA AGACGAGGCG GTGTATCTTA CTCCCTTTTA CGTCGCCGAA ACCAAACTCG CCGAGCGCCT TAACGCCCTC CGGGACGCCG GAGCCGCCGT GCGGCGGGTG GATACTGCCC AGGTGATACC CTGGGTGGAA AAGAGACTCG GGCTCCGGCT GGCCGAAAAG CAAGCCGAGG CGGTGTCCCT GGCGGTTTCG AACAAGATCC TGGTGATCAC CGGCGGGCCG GGTACCGGCA AAACCACCAT CATCAGGGCG ATCATCAGTA TTTTTCAGGC CCTGGGGGCG CGGGTCCTTC TGGCTGCCCC TACCGGGCGG GCGGCGAAAC GCATGCAGGA GGCCTCAGGG CACGAGGCCC GGACCATCCA CCGCCTGCTG GAGTTCAGCC CCGGGAAAGG CGGTTTTCAG CGCAATCAGG ACTTCCCCCT GGACGCCGAC GCCGTCATTG TGGACGAGGC CTCCATGATT GATACTCTCC TGATGAACAG CTTGGTCAGG GCCGTCCCGC TGTCCGCCGC CCTTATCCTG GTCGGGGACA CCAACCAACT GCCCCCGGTC GGTCCGGGAA ACGTCTTGCG GGACATCATC GACTCGGGCC GGTTCGGCGT GGTGACACTG ACCGAGATCT TCCGGCAGTC CCGGGAAAGC CGGATCGTGG TGAACGCCCA CCGCATAAAC CGGGGCGAGT TCCCCGATTT GAGCCCGCTG GGCTCCGGCC GGCCGTCTGA CTTCTATTTC ATCCAAGAGG AGGATCCGGA AACGGCGGTC CAGACCATCC TCAAGCTGTG CAAGGTACGC ATTCCCAGAC GTTTCGGATA CCACCCGATC CGGGACATCC AGGTACTGAC GCCCATGTAC AGGGGCCTGG TCGGCGCCGC GAACCTGAAC GCCGAGCTGC AAAACCTGCT GAACCCGGGA AAAGACGGGG TGGTCCGGGG CCACCGGATG TTTCGGACCG GGGACAAGGT GATGCAGGTG GTGAACAACT ACCAGAAGGA AGTGTTCAAC GGGGACATCG GCCGGATCAC GGCCGTGCAC TTGGAGCAAC AACAACTGAA GGTGGACTTC GACGGCCGCG CCGTCAGCTA CGAGTTTTCG GAGCTGGACG AACTGGTCCT GGCCTATGCG GTGTCCGTGC ACAAGGCCCA GGGGAGTGAA TACCCGGTGG TGATCATGCC GGTGATGACT CAGCACTACG TTCTCCTGCA GCGGAACCTG GTTTACACCG GGGTGACCCG CGGCCGGAAC CTGGTGGTGC TGGTCGGCAC CAAAAAGGCA TTGGCCATCG CCATCCGCAA CGACGAGCCG CGCCGGCGCT ACACCAGGTT GCGGGAGAGG CTTGCATATT ATGACCTGGG TAACGGGTAA
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Protein sequence | MEVIHGYLER ITYYNEENHF TVARLQETGK RELTTIVGNL AGITPGESLK LTGKWVQDPR FGPQFRVERF ETVVPATVNG IRKYLGSGLI RGIGPVMAKR IVKVFGLQTL DVIDRSPGRL TEVDGIGPKR VELITRAWAD QKEIRGIMIF LQDHGISAAY AAKIYRQYGN ASVEIVRTNP YRLAADVHGI GFVTADRIAR QVGIDPNSVT RAEEGTLYVL NESTSEGHVY LPYETLVSRA AEMLEVSRDL VVEAVERLAA DRRVVREDEA VYLTPFYVAE TKLAERLNAL RDAGAAVRRV DTAQVIPWVE KRLGLRLAEK QAEAVSLAVS NKILVITGGP GTGKTTIIRA IISIFQALGA RVLLAAPTGR AAKRMQEASG HEARTIHRLL EFSPGKGGFQ RNQDFPLDAD AVIVDEASMI DTLLMNSLVR AVPLSAALIL VGDTNQLPPV GPGNVLRDII DSGRFGVVTL TEIFRQSRES RIVVNAHRIN RGEFPDLSPL GSGRPSDFYF IQEEDPETAV QTILKLCKVR IPRRFGYHPI RDIQVLTPMY RGLVGAANLN AELQNLLNPG KDGVVRGHRM FRTGDKVMQV VNNYQKEVFN GDIGRITAVH LEQQQLKVDF DGRAVSYEFS ELDELVLAYA VSVHKAQGSE YPVVIMPVMT QHYVLLQRNL VYTGVTRGRN LVVLVGTKKA LAIAIRNDEP RRRYTRLRER LAYYDLGNG
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