| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1388 |
|---|
| Symbol | |
|---|
| ID | 6026346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1470586 |
|---|
| End bp | 1471296 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641594208 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001717529 |
|---|
| Protein GI | 169831547 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACGG TAAGGAATTT AAACGTTTAT TACGGTACCA TTTACGCTAT TCAAAACATC
TCCTTCGAAG TAAAGGAAGG GGAGATCGTT ACCCTGATCG GGGCCAACGG CGCCGGCAAG
AGCACGACGC TGCGTACCAT CTCGGGTCTG ATCAAGCCGA AAAGCGGCGA CATTGAGTTT
CAAGACCAGA AAATCACCGA CCTGAAGCCG CATGTGATCG TCAGCAAGGG CCTGATCCAC
GTCCCTGAGG GCCGGAAAAT TATCGGCAAT TTCACAGTGC GTGAGAATCT CATGATGGGG
GCGTACGCGC GCAAGGACCG TTCCGGTATC GCGGACACGC TGGAAGAGGT GTACACCCGC
TTCCCCCGGC TGAAGGAGCG GGAGAAGCAA TTGGGCGGGA CGCTTTCCGG CGGCGAACAG
CAGATGCTGG CCATCGGCCG CGGTTTAATG GCGAACCCCC GACTCTTACT GTTGGATGAA
CCGTCGATGG GACTGTCGCC GATTTTGACG GAAGAAATCT TTTCGATTAT CCGGACCATC
AACCAGAAGG GCACGACGAT CCTTCTGGTG GAGCAGAACG CCTACATGGC GTTTCAGATT
GCCCACCGGG CCTATGTGCT TGAAACCGGC CGGGTGATAA TGTCCGGGGA CTGCCAGATC
CTTCAGAACG ACCCGAAGAT CCGGTCCGCC TACCTGGGTG AAATCGCCTG A
|
|---|
| Protein sequence | MLTVRNLNVY YGTIYAIQNI SFEVKEGEIV TLIGANGAGK STTLRTISGL IKPKSGDIEF
QDQKITDLKP HVIVSKGLIH VPEGRKIIGN FTVRENLMMG AYARKDRSGI ADTLEEVYTR
FPRLKEREKQ LGGTLSGGEQ QMLAIGRGLM ANPRLLLLDE PSMGLSPILT EEIFSIIRTI
NQKGTTILLV EQNAYMAFQI AHRAYVLETG RVIMSGDCQI LQNDPKIRSA YLGEIA
|
|---|
| |