Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1380 |
Symbol | |
ID | 6026198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1463714 |
End bp | 1464361 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641594200 |
Product | TrkA domain-containing protein |
Protein accession | YP_001717521 |
Protein GI | 169831539 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000226197 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAT TCGCCGTGAT CGGCCTGGGA CGTTTCGGAT CGAGCGTGGC CACCACGCTG GCGAGAATGG GCTACGATGT GCTGGCGGTC GATACGGACG AGCAAAAAGT GGAGCGGATT GTGGACCGGG TGACGCATGC CGTGCAGGCC GACGCTCTGG ATGATGAGTC CCTGAAGGCC CTGGGAATGC GCAACTTTGA CGTGGTGATC GTCGCCATCG GGCACGACAT GCAGGCCAGT ATTCTGACCA CGGTCATGCT CAAAGAGATG GGCGTAAGGA CAGTGGTAGC AAAGGCCAAC ACCGAGCTTC ACGGACGGGT GCTGGCCCGG GTAGGGGCCG ACAAAGTGGT GTTTCCGGAA CGGGACATGG GCGTGCGTGT TGCCCGCAGC CTGGTATCCA AAAACCTGCT GGACCATATC GACCTTTCCC CCGACTTCAG TATTGTCGAG CTGGTGACCC CGAAGGATTT TGTGGGCAAG AGCCTTCTGG AGGCCGGAGT TAGAGGAAGG TACGGCGTGA ATATCCTGGC GATCCGGCGG GGGACCGAAG TGCTGATCGC TCCCGGGGCC AAGGAAGTGA TCCGGGAGGG AGACGTGCTG GTAGCCATCG GGCGGAACGA GCGCCTGGAG AAACTGGGAG GGGACTAG
|
Protein sequence | MKQFAVIGLG RFGSSVATTL ARMGYDVLAV DTDEQKVERI VDRVTHAVQA DALDDESLKA LGMRNFDVVI VAIGHDMQAS ILTTVMLKEM GVRTVVAKAN TELHGRVLAR VGADKVVFPE RDMGVRVARS LVSKNLLDHI DLSPDFSIVE LVTPKDFVGK SLLEAGVRGR YGVNILAIRR GTEVLIAPGA KEVIREGDVL VAIGRNERLE KLGGD
|
| |