Gene Daud_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1362 
Symbol 
ID6026043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp1434911 
End bp1435945 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID641594177 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_001717503 
Protein GI169831521 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0922453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGAGA AGATGTTGGA TCAGAGAATT GTGGCGCCCG GTCTGAAGGT GGAAGACGTT 
GACGAGGTTA CCCTGCGTCC CCGCTACCTG GACGAGTTCA TCGGCCAGGC CCGGGTCCGG 
GAGACGCTGG CCCTGTGCAT TGAGGCCGCC CGGCGCCGGG GCGAGGCTCT GGACCACGTG 
TTGCTTTACG GGCCGCCGGG ACTGGGGAAA ACCACCCTGG CGCACATCAT TGCGCGGGAG 
ATGGGTGGCA ACATCCGGGT CACGTCCGGG CCGGCGATCG AACGGCCGGG GGATCTGGCG 
GCGATTCTGA CCAACCTGGG TCCGGGCGAC ATCCTGTTTA TCGACGAGGT GCACCGCCTG 
TCCAGGACGG TGGAGGAAAT CCTCTACCCG GGGATGGAAG ACTTCGCCCT GGATATAGTA 
ATCGGAAAGG GTCCCGGAGC GCGCTCGCTC CGCCTCAACC TGCCGCGGTT CACGCTGGTG 
GGTGCGACCA CCAGGGCGGG GCACCTGACG TCGCCGCTGC GGGACCGCTT CGGGGTGGTC 
AGCCGGCTGG AATTTTACAG CCCGGAGGAC CTCCTGGCCA TAGTAATCCG GGGCGCAGGC 
ATCATCCGGG TCGACATCGA GCCCGCGGGG GCGGCCCTGA TCGCCCGCCG GGCCCGGGGG 
ACACCGCGGG TGGCGAACCG GCTGTTGAAG CGGGTGCGGG ATTACGTGCA GGTTCGGGCC 
CAGGGCGTAA TCACCGCCGA CAATGCGGTG GAGGCCCTGG AGTTTTTGGG GATTGACGAG 
TTGGGTCTGG ACAACACCGA CCGACACCTA CTGGCGGTGC TGATCGAGAA GTTCGGCGGC 
GGTCCGGTCG GACTGGACAC TCTGGCGGCG GCCACAGGCG AGGAGGCGGC GAACCTGGAG 
GACGTGTACG AGCCATACCT CCTGCAGTCC GGTCTCATCA CACGCACTTC CCGGGGCCGG 
GTGGCCACCC CGCTAGCCTA CCGGCACATG GGGAGCCCGC AACCGGCGAG CGCCGGTCAG 
GAGACCATCT GGTAG
 
Protein sequence
MGEKMLDQRI VAPGLKVEDV DEVTLRPRYL DEFIGQARVR ETLALCIEAA RRRGEALDHV 
LLYGPPGLGK TTLAHIIARE MGGNIRVTSG PAIERPGDLA AILTNLGPGD ILFIDEVHRL 
SRTVEEILYP GMEDFALDIV IGKGPGARSL RLNLPRFTLV GATTRAGHLT SPLRDRFGVV 
SRLEFYSPED LLAIVIRGAG IIRVDIEPAG AALIARRARG TPRVANRLLK RVRDYVQVRA 
QGVITADNAV EALEFLGIDE LGLDNTDRHL LAVLIEKFGG GPVGLDTLAA ATGEEAANLE 
DVYEPYLLQS GLITRTSRGR VATPLAYRHM GSPQPASAGQ ETIW