Gene Daud_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1340 
Symbol 
ID6025790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1415169 
End bp1416467 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content66% 
IMG OID641594155 
Productglutamate-1-semialdehyde-2,1-aminomutase 
Protein accessionYP_001717481 
Protein GI169831499 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGG ATCATTTCCG GTCGGCCCAG ATGTTCGCCG AGGCCCAGAA GTACATGCCG 
GGCGGCGTGA ACAGCCCGGT CCGCGCCTTC AAGGCGGTGG GGGGCGACCC GATATTTTTT
TTGCGCGGGG AAGGGGCGCT CCTGTTTGAC GTGGACGGCA ACCGGTACAT CGACTACGTG
GCCTCGTGGG GCCCCCTGAT CCTGGGGCAT GCCCACCCGC TGGTGGTCCG GGCCGTGAAG
GAGTGCGCCG AGTTCGGGAC CAGTTTTGGG GCGCCGAACG AACTGGAGAT CGAGCTGGCG
CGGCTCCTGG TGGAGGCCCT ACCGTCCGTG GAAATGGTCC GGCTGGTCAA TTCCGGCACC
GAGGCGACCA TGAGCGCCCT GCGGCTGGCG CGGGCCTACA CCAAGCGTGA AAAAATCGTG
AAGTTCGAGG GCTGCTACCA TGGCCACGCC GACGCGCTGC TGGTAAAGGC CGGTTCCGGG
GCGCTGACCC TCGGGGTGCC GACCAGCCCC GGGGTGCCGG AGGACACGGC TCGGAACACA
GTCGTGGCCG GTTTTAACGA CCTGGAAGGC CTGAAGGAGC TTTTCGCCCG GCTCGGGGAG
GAGATCGCGG CCGTGATCGT CGAGCCGGTC CCTGCGAATA TGGGGCTTGT CCTGCCCCGG
CCCGGTTTCC TGAAGGGGCT TCGGGATCTG ACCGCGGCGT ACGGTGCCCT GCTAGTTTTT
GACGAGGTGA TCACCGGGTT CCGGCTGAGT TACGGCGGGG CCCAGAATCT TTATGGCGTT
CAGCCTGACC TGACCTGCCT CGGAAAGATC ATCGGGGGCG GACTGCCGGT GGGGGCCTAT
GGAGGGCGCC GCGACATTAT GGAACAGGTG GCCCCGTCCG GGCCGGTCTA CCAGGCTGGA
ACCCTGTCCG GAAATCCCCT GGCGATGGCG GCCGGGATTT CGACCATCAA AGCGCTGGCC
GAGCCGGGCG TTTACGAGGC CCTGGAGTCG AAGACCCTGC GGTTGGCCCG GGGATTGGAG
GAGGCGGCGG CCCGGGCCGG GGCCGAAGTG TACATCACTC AAACCGGCTC GATGCTGTGC
GTATTCTTCC AGCCCGGCCC GGTGACCGAC TTTGCGGGGG CGCTGCGTTC GGACACCGCG
CGGTACAGCC GTTACTTCCA GGCGCTCCTG GAGCGCGGGG TGTACATCGC CCCGGCCCAG
TTCGAGGCGC TGTTTCTGTC GACGGCACAC ACCGACGAAC ACATCGACCG GACCCTGGAG
GCCTGCGAGG AAGCATTCCG TTTTGCTTTT TCCGGGTAG
 
Protein sequence
MTRDHFRSAQ MFAEAQKYMP GGVNSPVRAF KAVGGDPIFF LRGEGALLFD VDGNRYIDYV 
ASWGPLILGH AHPLVVRAVK ECAEFGTSFG APNELEIELA RLLVEALPSV EMVRLVNSGT
EATMSALRLA RAYTKREKIV KFEGCYHGHA DALLVKAGSG ALTLGVPTSP GVPEDTARNT
VVAGFNDLEG LKELFARLGE EIAAVIVEPV PANMGLVLPR PGFLKGLRDL TAAYGALLVF
DEVITGFRLS YGGAQNLYGV QPDLTCLGKI IGGGLPVGAY GGRRDIMEQV APSGPVYQAG
TLSGNPLAMA AGISTIKALA EPGVYEALES KTLRLARGLE EAAARAGAEV YITQTGSMLC
VFFQPGPVTD FAGALRSDTA RYSRYFQALL ERGVYIAPAQ FEALFLSTAH TDEHIDRTLE
ACEEAFRFAF SG