Gene Daud_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1295 
Symbol 
ID6025771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1370179 
End bp1371174 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content60% 
IMG OID641594112 
Producthypothetical protein 
Protein accessionYP_001717438 
Protein GI169831456 
COG category 
COG ID 
TIGRFAM ID[TIGR01877] CRISPR-associated endoribonuclease Cas6 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGA GCCTTAACGA ACTCTCCACT TCCGGTCTCT CCAATCTTCG CATCGCCCGT 
TACCGGGTTG AACTGGAAGC GGGTGCTGAT GGACTGATTC TACCTCGCTA CAAGGGTTCC
ACCCTACGTG GGGGGTTCGG ACGTGTCTTC CGCCGAATAT GCTGCGCCCA AAGGCAGGAC
GAATGTCACG GCTGCCTGCT CCGGGAGTCC TGCCCGTTCG CCTACGTATT TGAGACTGCG
CCGCCTGCCG GCGCGCAGGC CCTGCGGAAC CTGGAGAACA TTCCGCGCCC CTTTGTTATT
GAACCACCCT TGGAAACCCA ACAGGAATAC AAACCCGGAG AGAAACTGTC CTTTCACCTG
GTGCTCGTCG GGAAGGGCAT CAAGTTCCTT CCTTACTTCA TCGTCAGCCT CGATGAACTG
GGGCGTGTCG GCATCGGCAA GGGAAGACGT CCCTACCTGC TGCGCACGGT GAACTTCGTC
GGGCTGGATG GGGTCGAGAA AACCATTTTC TGCGCCTCCG ACCGTACCGT GCGTGATCCC
GGGACCTCGT TGAGCGGGGC CGAAATCATG AGCCAGACCA CCCCCAATGC TGCGAATGAC
CGTCTGCAAA TAAGGTTACT GACCATGACC CGGCTGAAAC ACCATGACCG GTTCGTGACC
GCGCTTCCGT TTCACGTGTT GCTCCGCGGA CTGCTGCGCC GGATCTCATC CTTGATGTAC
TTCCACCAGG GAGAAGAACT GGACGTTGAC TTTACGGGCC TTATCGAGCG CGCCGAGCGA
GTCCGCACCC TGTCCGAAGA CACGCGCTGG GTGGATTGGG ACCGGTATTC CGGCCGCCGT
GACGCCCGCA TCACCATGGG CGGCCTGGTC GGCAAGGTGA TCTACACCGG AGATGCGGCC
GAGTTCCGGC CCCTGCTGAA AATCGGCGAA TACGTTCACG TCGGCAAGGG CGCCGTCTTC
GGAATGGGGA AGTACCGGAT CGAGAGCATA GAATAA
 
Protein sequence
MNQSLNELST SGLSNLRIAR YRVELEAGAD GLILPRYKGS TLRGGFGRVF RRICCAQRQD 
ECHGCLLRES CPFAYVFETA PPAGAQALRN LENIPRPFVI EPPLETQQEY KPGEKLSFHL
VLVGKGIKFL PYFIVSLDEL GRVGIGKGRR PYLLRTVNFV GLDGVEKTIF CASDRTVRDP
GTSLSGAEIM SQTTPNAAND RLQIRLLTMT RLKHHDRFVT ALPFHVLLRG LLRRISSLMY
FHQGEELDVD FTGLIERAER VRTLSEDTRW VDWDRYSGRR DARITMGGLV GKVIYTGDAA
EFRPLLKIGE YVHVGKGAVF GMGKYRIESI E