| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1293 |
|---|
| Symbol | |
|---|
| ID | 6025840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1367096 |
|---|
| End bp | 1368652 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641594110 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717436 |
|---|
| Protein GI | 169831454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACTT GGACTGGACA CCCTTTGGTT GATGTCGGGA TTGCTACATT ATGTGTGATG
TGCCGGAAAA ACGATCCTCG GGACCTTACG ATGGAGGATT TGGATTCGGC GGCCGATCGG
ATGGCGGAAT ACTATTTCAG CGGGTTAATG ACCAGTTACA ACGCCTGTGT TTTTACAATG
AATGCCTATG ACAACCCCAC TTCCGGGCCT GAAAAGAGAA AAGAGTATGA GAATAGAGTA
CTACGTGCAC ATCGCTCAAT GCCGGATTCC GGAGCGAAGC ATTTTACTTG CCCCTTTTCC
GGCAAACCTG CGACCCATTT GATTGAGAGA AGGCAAATGC CGCTGCTTAC CGGAGAGAAT
GTGCTGAATT TCTATCCCGA AGGTCACAGC TTTCTCCCGA TCTTCGGTCC CTATTTGGTA
GCACTGCAGG CACTGCCGCT GGGAGGGCGG CGGGCCGAAG GACGACTCTT GATCGCTCAC
GGAGATGATC CTGCTATCAC TTTGGCTTTT GCTGAAAGGT ATTTGGCTGA TAATCAGCGG
CTGCTAAATT TGGCCAAAAG CGGTACTCTA CCTCGAACAA AAGGCCCTTC CCTAGATTTG
GAGCGCGAAC AGGCTGCGGG TACTTCCAAG CACCGGGTCA AGTATCCGGA TGCCAAGGCG
CCAGCCACTT TAATTATGAA TGACCTCATG GATATCTATC GTGTGCGTAT GGGGAATGAG
TTTAGGACTC GCCGGGATGT TTCGGTAACT GCCTATTGGT TGAGTAATTC GGGACAAGGA
CCTTCTTTGG AAATCTTTCA TCTTCCGATA CAGGTGACGC GGTTTTTGAC AATTGTGGAT
GCAGCACCTT ATGGGATACG GTGGCGAAGC CTGGTAGCCA AGGCTTGGCG GCGTCCTTAC
GCCCAGGAAA CGCCAGTCCC CGAAGGTAAA GAGGAAAACA AGGGTGGTGG AAGAAAAAAG
CGGGATACTC AACAGTTACC GGGCGGCCCC GGTCGTTCCC GGAACGATGT CATCGCGGAC
TTGTTTGCGA TCTATGAGCA CGGATTTATG GATTTGGGTG CCGCTAGGAA CTTCTTAAGG
CGTCACTTGC GGGGAGATAC TCCGGTTTCG GGAGTTGTGA AATTGCGGGA GCCGAAAATG
ACGGATTGGT CTTTAACTAA AATTTTTCTG AAAGAGGTGA TGGGTGTGGA TGAACGGCGA
ATTGAAGCTA TCAAGCAGTT CGCCGACCGT TTGGCTGATC ATATAAGCCA AACGAATGAC
AAGGGGTTGT TTCGGGACCT GGTATACGGT CAACGGCCTT GGGAGGTACG CAACGCCTTG
ACCAAGGCCC AGCGCAATCA GGCCAAAGAT CACGGCCGAT TACTCTTCGG GCTGGATGAA
TATTTGGATG TTTTCGAGGC CGATCACGCT GTCGGGCGTA GCGACTGGAG CCTGTCAAGG
GACCTGATTT CTATTCGACT AGTAGAACAG CTTTACGGTA AAGGGTTTTT TGGCCGGGAA
GATAATCGTG AACTTTTAGC TGAACCCGAG ATACAGGTAG ACGAAGAGAC CAATTAA
|
|---|
| Protein sequence | MLTWTGHPLV DVGIATLCVM CRKNDPRDLT MEDLDSAADR MAEYYFSGLM TSYNACVFTM
NAYDNPTSGP EKRKEYENRV LRAHRSMPDS GAKHFTCPFS GKPATHLIER RQMPLLTGEN
VLNFYPEGHS FLPIFGPYLV ALQALPLGGR RAEGRLLIAH GDDPAITLAF AERYLADNQR
LLNLAKSGTL PRTKGPSLDL EREQAAGTSK HRVKYPDAKA PATLIMNDLM DIYRVRMGNE
FRTRRDVSVT AYWLSNSGQG PSLEIFHLPI QVTRFLTIVD AAPYGIRWRS LVAKAWRRPY
AQETPVPEGK EENKGGGRKK RDTQQLPGGP GRSRNDVIAD LFAIYEHGFM DLGAARNFLR
RHLRGDTPVS GVVKLREPKM TDWSLTKIFL KEVMGVDERR IEAIKQFADR LADHISQTND
KGLFRDLVYG QRPWEVRNAL TKAQRNQAKD HGRLLFGLDE YLDVFEADHA VGRSDWSLSR
DLISIRLVEQ LYGKGFFGRE DNRELLAEPE IQVDEETN
|
|---|
| |