Gene Daud_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1279 
Symbol 
ID6026786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp1348779 
End bp1349873 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content65% 
IMG OID641594096 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001717422 
Protein GI169831440 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG GGCAATGTAA GGAGGACCGG ACGACGATGC AAAAAACGTA TAAGATCGCG 
GTAATCCCGG GGGACGGCAC GGGCCCCGAG CAGGTGCGCG AGGGTTTGAA GGTGCTGCAC 
GCGGCCGCCG GCAAAGAGGG CTTCGCGCTG GAGACGACGG TGCTGGACTG GGGGGGCGAG 
TACTACCTGC GGACCGGAGA GGTGCTGCCC CCGGACGCGG TCGAGCAGCT CAAGCGCTAC 
GACGCCATCT ACCTGGGGGC GATCGGGCAC CCCGAGGTGC GGCCCGGAAT CCTGGAAAAG 
GGTATTTTGC TCCGCCTGCG ATTTGAACTC GACCAGTACA TCAACCTCCG CCCGGTGAAG 
CTCTACCCCG GCGTGGAAAC GCCCATTGCC GGCAAGGGCC CCGAGGACAT CGACTTCGTG 
GTCGTCCGGG AGAACACCGA GGGCCTCTAC GCCGGGAGCG GCGGCTTCCT GAAGCGGGGC 
ACGCCGGACG AGGTGGCCAT CCAGACCTCG ATCAACACCC GCAAAGGGGT CGAGCGGTGC 
GTCCGGTTCG CCTTCGAGTA CTGCCGCAAG CGCGGCGGGC GCCGCAAGGT CACCCTGTGC 
GGCAAGACCA ACGTCCTGAC GTTCGCGTTC GACCTGTGGG AGCGGGTGTT CAACGAGGTG 
GGCGAGGAGT ACCCGGATAT CGAGCGCGAC TACGCCCACG TGGACGCGAT CTGCATGTGG 
ATGGTGAAAA ACCCGGAATG GTTCGATGTG ATCGTCACCG ACAACATGTT CGGGGACATC 
ATCACCGACC TGGGGGCGAT GCTCCAGGGG GGGATGGGGA TCGCCGCCGG GGGGAATTTG 
AACCCCGAGG GCGTGTCCAT GTTCGAGCCG ATCGGCGGCT CGGCTCCCAA GTACACCGGG 
AAGAACGTGA TCAACCCGCT TGCCGCCGTC TGCGCCGGGG CGATGATGCT GGAGCAGCTC 
GGGGAAACCG GGGCGGCCGC CCGGATCGAG GAAGCGGTGA AGAAAGTATG CGCCGGGCAC 
TTAAAGAGCC TGGCGGCCGG CCGGATGGGC TACGGGACCG ACGAGGTCGG CGACTTGGTG 
GTGAGCCACC TGTAG
 
Protein sequence
MKIGQCKEDR TTMQKTYKIA VIPGDGTGPE QVREGLKVLH AAAGKEGFAL ETTVLDWGGE 
YYLRTGEVLP PDAVEQLKRY DAIYLGAIGH PEVRPGILEK GILLRLRFEL DQYINLRPVK 
LYPGVETPIA GKGPEDIDFV VVRENTEGLY AGSGGFLKRG TPDEVAIQTS INTRKGVERC 
VRFAFEYCRK RGGRRKVTLC GKTNVLTFAF DLWERVFNEV GEEYPDIERD YAHVDAICMW 
MVKNPEWFDV IVTDNMFGDI ITDLGAMLQG GMGIAAGGNL NPEGVSMFEP IGGSAPKYTG 
KNVINPLAAV CAGAMMLEQL GETGAAARIE EAVKKVCAGH LKSLAAGRMG YGTDEVGDLV 
VSHL