Gene Daud_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1270 
Symbol 
ID6026566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand+ 
Start bp1335044 
End bp1336042 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content64% 
IMG OID641594087 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001717413 
Protein GI169831431 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000277598 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTGA GAATCGGCAT TAACGGGTTC GGACGCATCG GGCGCTGCAT TTTCCGGATT 
GCCCGGAGAC GTCCCGACGT CCGGGTGGTG GCCGTCAACG ACCTGGGAGA CATCAAAACC 
CTGGCCCACC TGCTGAAATA CGACTCGGCG CACGGCAACC TGAGAGGTCA GTTGCGGGTG 
GACGGCGACC GGATCTGGGT GGATGACGAG GAGACAGTGT TTTTCAGCAA GTCCGCGCCC 
GAAGAACTGC CATGGGGAGA ATACGGCGTG GATGTGGTGG TCGAGTCCAC CGGGAGGTTC 
CGCAGCGTCC AGGAGGCGAG CCGGCACCTC GCCGGCGGAG CGCCCAGGGT CGTGGTCACC 
GCTCCGCTGA AGGGCCCGGG ACGTACCATC GTGATGGGCG TCAACGAGCA GGATTATGAT 
CCGGCCACGG ACCTGGTGGT GTCCGGCGCC TCCTGCACCA CCAACTGCCT GGCCCCGATC 
GCCAAGGTGT TGGGGGCGCA CTTCAAGGTC CGTTCGTCCA TGGTCTCCAC CATCCACGCC 
TACACCAACG ACCAGCGGCT GTTGGACTCG GCACACTCCG ACCTGCGGCG GGCCCGGGCG 
GCCGCCCTTT CCATTGTGCC CACCACCACC GGTGCCGCCA AGGCCGTCGG CCTCGTCCTC 
CCCGAGTACA AGGGGCACTT CGAGGGGCTG TCTTTCCGGG TGCCCACTCC GGTGGTCTCG 
GTTCTGGACG CCGTTTTTCA GGTGGAGATC CCGGTCACGG CCGAAGAGGT CAATGCCGTC 
CTGCGCGATG CCGCCAAAAC GCCGCCCCTG CAGGGGATTT TGGATTTCAT TGAAGAGCCG 
GTGGTTTCCT GCGACATCAT CAGGAACACC CACTCTTCAA TCGTGGACGG GCTGTTGACG 
GCTGCGGTCG ACCAGTTGGT CAAAGTGGTG TCCTGGTATG ACAACGAATG GGGATATGCC 
TGCCGCGTAT TGGACCTGGC GGTGCACATC ACCAGGTAG
 
Protein sequence
MTLRIGINGF GRIGRCIFRI ARRRPDVRVV AVNDLGDIKT LAHLLKYDSA HGNLRGQLRV 
DGDRIWVDDE ETVFFSKSAP EELPWGEYGV DVVVESTGRF RSVQEASRHL AGGAPRVVVT 
APLKGPGRTI VMGVNEQDYD PATDLVVSGA SCTTNCLAPI AKVLGAHFKV RSSMVSTIHA 
YTNDQRLLDS AHSDLRRARA AALSIVPTTT GAAKAVGLVL PEYKGHFEGL SFRVPTPVVS 
VLDAVFQVEI PVTAEEVNAV LRDAAKTPPL QGILDFIEEP VVSCDIIRNT HSSIVDGLLT 
AAVDQLVKVV SWYDNEWGYA CRVLDLAVHI TR