| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1269 |
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| Symbol | |
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| ID | 6027599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1331461 |
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| End bp | 1334826 |
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| Gene Length | 3366 bp |
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| Protein Length | 1121 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641594086 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_001717412 |
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| Protein GI | 169831430 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR01443] intein C-terminal splicing region
[TIGR01445] intein N-terminal splicing region
[TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0309898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGAAA TCGCCCAACT CAGTGACAGT GGCCAGAAAG TGTTCGAAGC CCGCTACGCG
GCTAAAGACG AACAGGGCCG GGTAACCGAG ACATTTGAAC AGGCGGTTCA CCGCCTGGCG
CGCACCACCG CCCTGGCCGA GAAAGCGCAA GACCGCGCCG CCTGGGAAGA GAAGTTCGCC
GCTTCCATCG GCGGCTTGCT TTTTGTCCCC TCGACGCCCA TCTGGGCAAA CATCGGGAAA
ACCGACCGCC CCTGGCAGCC GGGGGCTTGT TTTGTGCTGG CCGTGGAGGA TTCCCTGGAG
TCCATGTACC AGACCCTCAA GGACACAGCG ATGGTGTTCA AGTCCGGCGG CGGAGTGGGA
TACAACTTCA GCGCCATCCG CCCACGGGGC TCGATGGTGC GGTCGACCAA GGGACAGGCC
TCGGGCGTGG TGGAATTGAT CCGCCTGTAC GACGCCTCCT CCGGGATGGT CATGCAGGGC
GGCGTCCGCC GGGGCGCCTC GATGGGCATC CTGAACATCG ACCACCCCGA GATCATTCAC
TTCATTAACA GTAAGCGCGG CGGGGACATC ACCCACTTCA ACCTCTCGGT CGGAGTGACC
GACGCGTTCA TGGAAGCCCT GGAGCGGGAC GAAGACTGGC CGCTGGTGTT CAACGGCGAG
GTGCACCAGA CGGTGCCGGC CCGGGAACTC TGGGACCTGA TCACCGAATC CGCCCACGCC
TGCGGGGATC CCGGGATCAT CTTCCTGGAC CGCCTGCAGC GGGACAACCC GGTTCCGGAA
AAGAAGATCA ACGCCACCAA CCCCTGTGTG ACAGGTGACA CCTGGGTGAC CACCGGAGCA
GGGCCCCGGC AGGTAAGGGA ACTGGTGGGC CGTCCCTTTG AGGCCATTGT TAACGGGAAA
GCTTACGGGA CAGGGAAAGA CGGCTTTTTT CAGACCGGGA CCAAACCTGT GGTCAAGTTG
TGCACCAGGG AAGGTTATAC GGTCCGGCTG ACGGCGGACC ACATGATCCT GCGGGTGACC
GATAAAACCC GTTACCGCCT GAGCCAGGAA TGGGTTCCTG CAGCGGACCT GAAGGCTGGC
GATCAAATTG TGCTGCATAA TCACCGGCCG TTGCCCGGCT GGCCCGGCGC TCTAACCGAA
GGAGAAGGAT ACCTGCTGGG CCTCCTAGTG GGCGACGGAA CACTGAAAAA AGAAACTGCC
ATTCTCAGTA CCTGGGTTAA AAAGCAAGCG GTCAACGGCT CCGGGGCCGG AGACGGAGTA
GATTCCGTGA TGCAGCTGGT GCTGCAGTAC ACCGGAAAAA TGCGTCACCG GGCTGATTTT
ACCGGCTGGG ACCCGGTCAA GGGACGAAAC GAGTACCGTT TTAAATCTGC CGGGATAAAG
GTGCTGGCGG AACGGATGGG CCTGGGTCCC GGCAGGAAAA CCGCCACTCC GGAAATCGAG
GGTGCTTCCT CGGAAGGGTA CCGCGGGTTC CTGCGGGGCC TGTTCGATGC GGACGGAACG
ATTATAGGAG AGCAGCAAAA AGGTGTCAGC ATCCGCCTGA CCCAAAGCAA TCGCGACCTT
TTGGGCATAG TTCAACGGAT GCTGGCGCGA CTTGGCATCA TCAGCACCAT CTACGAAGGG
CGGCGTCCTG CCGGCCTGAA ATCTCTGCCG GACGGCAATG GCGGTAACAA AGAGTATCAC
ATCAAGGCGC AGCATGAGCT GGTCATCAGC AGGGACAATA TTTCCGTATT TGCTGAGCGG
ATCGGTTTCG GAAATAGTGA AAAAGCCGGC AGGCTCAAGT CCCTTCTTGA AGCATACAAG
CGTGACCTAA ATCGCGAACG CTTCACAGCG ACAGTGCTGT GCGTCGAAGA AGACGGGATA
GAGGACGTTT ATGATGTTCA AGTACCGGGA ATCAATGCCT TTGACGCCAA CGGCATAGTT
GCCCACAACT GTGGCGAACA GCCTTTATCG CCGGGCGAAT CATGCCTGCT GGGCAGCGTG
AACCTGGCCC GGATGCTGAA GCCGGGCCGG GACGGGTACG TGGTAGATTG GGAGCTGCTG
CGCGACACGG TGCGGCTGGG GATCCGTTTC CTGGATAACC TTATCGACGT GGCCGAATAC
CCGCTGGAGT TCATCGCCGA AGCCACCCGG GCCACCCGCA AGGTGGGCCT CGGGTACACC
GGACTGCACG ACCTCTTGAT CAAGATGGGT TTACCCTACG ACGCGGAAGA GGGCCGTCGT
TTCGCCGGCA CCGTCTTCAA GGCGGTGCAG GACGCGGCAC TCGCCTACTC CCGCGAACTG
GCCGGCGAGC GGGGCTGCTT CCCGGAGTGG GAACGGAGTG TGTTCCACCC CCATGAGAAG
CGGCGCAACG CGGCCTGCAT CACGGTCGCG CCCACCGGCA GCGTGACCAC GATCGCCGGG
TGCGAGGGCT ACGGCATCGA GCCCATCTTT GCGGTGGCCT ACACGAAGGA CACTGACGTG
GCCGGTTCCT TCGAGGTGTT TTCGCCGCTG TTCCTGGAGG CCTGCGAGCG GCTGGGGGTG
TCCCGTGAGG TGATGTCCGA GGTGGCCCGT CGCGGCGGCT GCCAGGGAGT GGAGGGGGTA
CCGCCCGAAC TGGCCCGGAT CTTCAAGGGG GCGCAGGAAA TCAGTCCGCG CGATCACATT
CTGATGCAGG CCGAAGTCCA GAAGTACGTC TGCAACGCCG TCAGCAAGAC CATCAACCTG
CCTAATTCGG CCACCATTCA CGATATCGAA ACCTGCTACC GGTTGGCCTA TGAACTGGGG
CTCAAGGGCG TCACCGTCTT CCGAGACGGC TGCAAGCAGG GCGTGGTGAC GGTGGGAAGG
AAGAAGCGTA AACCCGTGCC GGGCGAACTG GCCCGGGGCG AGATCATGCC CCGGCCGGAG
AACGCCCAGG GGGTTACGCA CCGGCTGGAC TCCGGGTGCG GCAAGATCTA CCTGACTGTG
AACTACCACC CCGCCACCGG CGAGATCCTG GAGACCTTCA TCACCACCGG TTCGGACGGG
GGCTGCCTGA TTTACACCGA AGCTACTTCC CGCCTGATCA GCCTGGCGAT CAGGGGCGGG
ATACCGTTGG AAGAGATCAT CGGGCAGCTG CAGAGCACGC ACGCCTGCCC GTCCTACCAA
CTGGCCCGCG GCCGCGGCCG GCAGCTTTCT CCGGGCAAGT CCTGCGCCTC GGCCATCGCC
CGGAAACTGA TCGAAATCCA GACCGAACTG GCCCGTCGCT GCAACGGCGG CGAGATTCCC
GCCCCGTGGG GGGTCCGCAA TCCGGACACG GAACCAGGGC CGGACCGCTG CGAGGTCTGC
GGGCTCCGGA TGAACCGTGC GGAGGGATGC TACGTCTGCC CGCACTGTGG ATTCGCCAAG
TGCTAA
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| Protein sequence | MVEIAQLSDS GQKVFEARYA AKDEQGRVTE TFEQAVHRLA RTTALAEKAQ DRAAWEEKFA
ASIGGLLFVP STPIWANIGK TDRPWQPGAC FVLAVEDSLE SMYQTLKDTA MVFKSGGGVG
YNFSAIRPRG SMVRSTKGQA SGVVELIRLY DASSGMVMQG GVRRGASMGI LNIDHPEIIH
FINSKRGGDI THFNLSVGVT DAFMEALERD EDWPLVFNGE VHQTVPAREL WDLITESAHA
CGDPGIIFLD RLQRDNPVPE KKINATNPCV TGDTWVTTGA GPRQVRELVG RPFEAIVNGK
AYGTGKDGFF QTGTKPVVKL CTREGYTVRL TADHMILRVT DKTRYRLSQE WVPAADLKAG
DQIVLHNHRP LPGWPGALTE GEGYLLGLLV GDGTLKKETA ILSTWVKKQA VNGSGAGDGV
DSVMQLVLQY TGKMRHRADF TGWDPVKGRN EYRFKSAGIK VLAERMGLGP GRKTATPEIE
GASSEGYRGF LRGLFDADGT IIGEQQKGVS IRLTQSNRDL LGIVQRMLAR LGIISTIYEG
RRPAGLKSLP DGNGGNKEYH IKAQHELVIS RDNISVFAER IGFGNSEKAG RLKSLLEAYK
RDLNRERFTA TVLCVEEDGI EDVYDVQVPG INAFDANGIV AHNCGEQPLS PGESCLLGSV
NLARMLKPGR DGYVVDWELL RDTVRLGIRF LDNLIDVAEY PLEFIAEATR ATRKVGLGYT
GLHDLLIKMG LPYDAEEGRR FAGTVFKAVQ DAALAYSREL AGERGCFPEW ERSVFHPHEK
RRNAACITVA PTGSVTTIAG CEGYGIEPIF AVAYTKDTDV AGSFEVFSPL FLEACERLGV
SREVMSEVAR RGGCQGVEGV PPELARIFKG AQEISPRDHI LMQAEVQKYV CNAVSKTINL
PNSATIHDIE TCYRLAYELG LKGVTVFRDG CKQGVVTVGR KKRKPVPGEL ARGEIMPRPE
NAQGVTHRLD SGCGKIYLTV NYHPATGEIL ETFITTGSDG GCLIYTEATS RLISLAIRGG
IPLEEIIGQL QSTHACPSYQ LARGRGRQLS PGKSCASAIA RKLIEIQTEL ARRCNGGEIP
APWGVRNPDT EPGPDRCEVC GLRMNRAEGC YVCPHCGFAK C
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