| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1260 |
|---|
| Symbol | |
|---|
| ID | 6026787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1320951 |
|---|
| End bp | 1322198 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641594077 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717403 |
|---|
| Protein GI | 169831421 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3864] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACA CGCAGGCCAT GCGCCGTGAG CTGGACGACT TGAAGGCGCT CCTGTTCCTG
AAAACGCCCT ACCTGGCCCT CTTGTTGAGC AAAATGCGCA TCGCCGTCAG TCACGCCGTG
CGCACCGTGC TGGCCACGCC CAATGGGGAG ACGATCGTGA ACCCGGATTT CTGGGGCAAG
CTCCGCAACC GGGAAGAAAA GACCTTCGTC CTGGTGCACG AGGCCCTACA CCTGGCTTTT
CGCCATCCTT GGACGGTCCA GGGGCGCGAC CGGGCGTTAT TCAACGTTGC GGCCGACGTG
GTGGTCAACG AGATGCTCTT CCGGCACGGC TACCACGAGG CCGCCGGCAA TCCGGTGACC
GCCCCGATGG TCAGGGAAAT GCTGTGGGCT CGAAATGTAC CCATCACCGT TGAGGAATTG
CGCCGCGCCT CCAGCGATGA GATTTACCGC CTGCTGGTGT CCGCCAGGGC CCAGGATACC
GCGGAGCAAA TGCTCAATGA CGCCCCCCGG GATCTCAATC CCGAGGAAAG CGAACCGCCG
GATACGGAAA AAGAGATCGT CCAGGAGGGT TCGCAGGGGC CGGGCGAAGA CCCGGAGGAA
TACTGGCGGG CGACAGTGGT GGAAGCCGTG GTGGTGGCCC AGGCGGCGGG GACTTCCCCG
GGTGAACTCC AGCGGGTCGT GGAGGAGTCC CTTAAACCGC GGGTGAACTG GCGCAGCCAA
CTGAAAAACG GACTGCGTGA TGCCGTGGGC CGCACCGTGG TGTGCACCTG GGAACGGCCG
TCACGGCGCT ATGCCACCTT TCCGGGGATC AAGAGGTTGG GGGTGCAAAC GGTCTGGGCC
CTCGTGGACT GCTCTGGTTC AATCACCGAA CGGGCACTGG CCCAGTTCGT GGCCGAGGTC
TGGGCTCTGT CCCGGGTTTT CCGGTGCGAA CTGCGGGTAC TGCCTTGGGA CGCCGCCGCC
TACCCGGAAA TCAGGGTGTA CACTCCCGGA CAGGTGCAGG CGCGGGTTGT CTCGGGGCTT
TGGGGCGGGG GCGGCACGCT GCTGGCCCCG GCACTGCGCC GGCTGCAACG GCGGATGCGG
GCCCAGGACG TGGTGGTGAT CATTTCCGAC GGGCATATCG GCGACCTGGA GAACGCCGAA
ACTTTAAGGC TTTACCGGAT GGTGTCCCGG AAAGCAGCCG GCCTGATTTT CCTAACCAGC
GACCGGTACC CGGACCTCCC CCACACCCGG GTGATCGACT TCCGCTAG
|
|---|
| Protein sequence | MDDTQAMRRE LDDLKALLFL KTPYLALLLS KMRIAVSHAV RTVLATPNGE TIVNPDFWGK
LRNREEKTFV LVHEALHLAF RHPWTVQGRD RALFNVAADV VVNEMLFRHG YHEAAGNPVT
APMVREMLWA RNVPITVEEL RRASSDEIYR LLVSARAQDT AEQMLNDAPR DLNPEESEPP
DTEKEIVQEG SQGPGEDPEE YWRATVVEAV VVAQAAGTSP GELQRVVEES LKPRVNWRSQ
LKNGLRDAVG RTVVCTWERP SRRYATFPGI KRLGVQTVWA LVDCSGSITE RALAQFVAEV
WALSRVFRCE LRVLPWDAAA YPEIRVYTPG QVQARVVSGL WGGGGTLLAP ALRRLQRRMR
AQDVVVIISD GHIGDLENAE TLRLYRMVSR KAAGLIFLTS DRYPDLPHTR VIDFR
|
|---|
| |