Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1256 |
Symbol | |
ID | 6026447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1316250 |
End bp | 1317284 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641594073 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_001717399 |
Protein GI | 169831417 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGAAAA AGAGGAGAAT TCTAGCCTGG ATAGTGACCG TAGTGTTCGT GCTGGGGCTG GCTGTGGCGG CCGGCTGCGG CGGTGGGAAG GCGCCGGCAC CCGCACCCCA AGAGGAGAAG AAGCCGTGGC CGACTTCCAT GACCATCGGC GCCGCATCCA TCGGCGGCAC TTATTACCTG TATGCCGGCG GCTGGAGCCA AGTCATTGAG AAAGTCACGG GGATTCCCAC CGCCGTGGAG GTGACCGGTG GTCCGAACCA CAATATGCAG TTAGTGCATA ACGGTGACCT GGAACTGGGT ATGGTGACCA TGGGTCCAGC CTTCGAAGGC TGGAACGGTG AAGGCGACTG GACGCAAGGG GTCAAGATGA CCAACGTACG GGCGATTTTC CCGATGTACA CCACTTACTC CCAGTGGTGG GCCTTCAAGG ATTCTGGCAT CAGATCCATC ACCGACCTGG CGGGCAAGAG AGTCGGCGTC GGCCCAGCCG GCGGCACGGC CGGAACCTAC CATCCGCGCA TCCTGGAGTT GCTGGGAATT AACGCCACCG TGCGGCACGC CGGTATCGGC GACCTGGTGG CCCAGCACCA GGACGGGCAG TTGGACGCGA ACAGCTTTGC GGCTGGCATT CCGGTTTCGA GCGTGATGGA GGCGGCGGCG CAGAAGGAAT TGGTTCTCTT CGGGGTGGAC GGCGAGGCCC GGGATAAGGT CTGCGCCGAG TGGCCCTTCT GGAGCCCGTC GGTCATTCCG GCCGGTGCGT ACGACTTCCT GACCGAAGAC GTGCAGACGA TCGAAATGTG GAACATGGCC ATCGCCCACA AAGACCTGCC AGATGATCTG GTTTATGAGA TCGTCAAGGG TGTATTCGAG AACCGGGAGA TGATGATCAC GGCGCACCCG GCCGCCAAGG AGACGCTGGC GGAGAACGTG GTCAAGAACA CCTGGTTGCC GATGCATCCT GGAGCCATCA AGTACTACGA GGAAATCGGC ATCGAACTGC CGGCGGAAGT CTACCCGGCG GAGTATAAGA AGTAA
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Protein sequence | MLKKRRILAW IVTVVFVLGL AVAAGCGGGK APAPAPQEEK KPWPTSMTIG AASIGGTYYL YAGGWSQVIE KVTGIPTAVE VTGGPNHNMQ LVHNGDLELG MVTMGPAFEG WNGEGDWTQG VKMTNVRAIF PMYTTYSQWW AFKDSGIRSI TDLAGKRVGV GPAGGTAGTY HPRILELLGI NATVRHAGIG DLVAQHQDGQ LDANSFAAGI PVSSVMEAAA QKELVLFGVD GEARDKVCAE WPFWSPSVIP AGAYDFLTED VQTIEMWNMA IAHKDLPDDL VYEIVKGVFE NREMMITAHP AAKETLAENV VKNTWLPMHP GAIKYYEEIG IELPAEVYPA EYKK
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