| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1255 |
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| Symbol | |
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| ID | 6027252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1314109 |
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| End bp | 1316097 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641594072 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001717398 |
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| Protein GI | 169831416 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGG GCAAACAGCA CGAACCAGTT GATCCAGGCC CGCAATCCGG GTCGGGGAAA
ATCACGGATC AAATCGACTT TGACCAGATC GAGGCCCTCG ATTCCTCAGG CCACCGCCGG
CTGAGCGGAT GGCTGGCCAG GTTGGTTGCG GTCTGGGCCA TCTTCGCCGC CGGTTTTCAC
CTCGTTGTCC TTGTGTTTCA CCCGATAGAC CCGTGGTTAT TTCGCAACTA CCATCTGGTG
TTGCTTGGGG TCCTGGGTTT CATCCTCATT CCGGGTTGGA GCAAGGCTAA GGAACGGGTG
CACTGGCTGG ACTGGGTGTT TGTGGTCCTG CTGCTGGTGT GCGGTTGGTA CATCGTCCAC
CATTTCCAGG CGCTGCTTTG GCGCGCTGGG GTGGTACCCA CCAAAATGGA CTTCTACGTA
GCCCTGATCG GCGTGCTCCT GGTTCTGGAA CTGGTGCGGC GGGCCAGCGG CTGGGCGCTA
CCCATCCTGT GCAGCGTATT CATCGCTTAC GCCTTTCTGG GTCCGTACCT GCCCGGCATG
CTCCAGCACC GCGGGTACTC CATGGAGCGG TTTTTCACCT ACATCTACAG CCTCGACGGC
GTGTTCAGCG TTCCCCTGGC CATTTCTTCC AAGTACATCA TCCTGTTCAT TATTTTCGGC
GCTTTCTTGC AGGTGTCCGG CGTGGGCCGG TACTTTGTGA AGTGGGCGTT CTCGGTCAGC
GGGCACGCCC GCGGCGGGCC GGCCAAGGTG GCCGTTATCG CCAGCGCCCT GATGGGCACC
ATGAACGGCA CCTCGGCGGG CAATGCCGTG GCCACGGGCA GCTTCACCAT CCCGCTGATG
CGCAAGGTCG GGTATTCGCC GCGGTTTGCC GCCGCTACCG AGGCGGTAGC TTCCACCGGC
GGGCAGATCA TGCCGCCGGT GATGGGGGCC GGCATCTTCA TCATGGCGGA GCTGACCGGA
ATCCCCTTCC AGCACCTTAT AATCGCCGGG ATCATTCCGG CGTTGCTCTA CTTCATCTCG
GTATATTTCA TGGTCGACCT GGAGGCGATA AAGCTCAAGC TGGTCGGTTT TCCCAGGCAT
ATGCTCCCCT CGTTCCGGTC GGTGATGAGA CAGGGCTACC TGTTCCTGCC CGTGCTGATC
TTGTTCGTGA TGCTCTTAAT GGGGCGGTCG GTGGTCATGG CCGGGTTCTG GGCCATTGTC
AGCAGCCTGT TGGTGAGTTG GTTCAGTCGG TCGACGGCCA TGGGACCGTC CAAAGTCTTG
AAAGCGCTTG AAACCGGTGC CAAAAACGCA GTACAACTCA TGGCCGTGTG CGCGGGGGCC
GGCATCATTA TGGGGGTAAT CGCCCTCACC GGGGTCGGCA TGAAGTTCGC GTCGGTCATT
CTGGGCATCG CCGATACCAA CCAGTTCCTG GCGCTTGTTT TTGCAATGGG CATCTCCATT
GTCCTGGGGA TGGGCCTGCC GACCACGGCC GCCTACGCGG TGGCCGCTTC GGTGGTGGCC
CCGGGCCTGA TCCAGCTCGG GATAACGCCC CTGGTGGCCC ACTTCTTCAT CTTCTATTTC
GCCTGTGTTT CGGCGATTAC ACCCCCGGTG GCGCTGGCGG CGTACGCCGC GTCCGGCATT
AGCGGTTCGG ACCCGATGAA AACATCGGTC ACCTCCTTCC GGTTGGGAAT CGCCGCGTAC
ATTGTGCCGT TCATGTTTTT CTACGCTCCG GAGATTTTGA CCCACGACAA CCTGCTGAAA
CTGATCCTGC ACTCGTTCAC CGCTCTGATT GGCATCATCG CCCTCTCCTG CGCGGCGCAA
CGCTTCTACT TCGGCCGGCT GAACGTGCCG CTGGCGGTAG TGATGTTCGT GACGGCGGTA
AGCCTGGTTT CTCCGAACCT GTACCTGGGC GGTGCGGGCT TAGCCGTACT AGCCGGGCTG
TTCTTCTACC AGCGGTACTA CCGGCGGCGG AACGACCAAG CGCCGGGCGC GCCGGCCGTG
GCGGGGTAA
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| Protein sequence | MTQGKQHEPV DPGPQSGSGK ITDQIDFDQI EALDSSGHRR LSGWLARLVA VWAIFAAGFH
LVVLVFHPID PWLFRNYHLV LLGVLGFILI PGWSKAKERV HWLDWVFVVL LLVCGWYIVH
HFQALLWRAG VVPTKMDFYV ALIGVLLVLE LVRRASGWAL PILCSVFIAY AFLGPYLPGM
LQHRGYSMER FFTYIYSLDG VFSVPLAISS KYIILFIIFG AFLQVSGVGR YFVKWAFSVS
GHARGGPAKV AVIASALMGT MNGTSAGNAV ATGSFTIPLM RKVGYSPRFA AATEAVASTG
GQIMPPVMGA GIFIMAELTG IPFQHLIIAG IIPALLYFIS VYFMVDLEAI KLKLVGFPRH
MLPSFRSVMR QGYLFLPVLI LFVMLLMGRS VVMAGFWAIV SSLLVSWFSR STAMGPSKVL
KALETGAKNA VQLMAVCAGA GIIMGVIALT GVGMKFASVI LGIADTNQFL ALVFAMGISI
VLGMGLPTTA AYAVAASVVA PGLIQLGITP LVAHFFIFYF ACVSAITPPV ALAAYAASGI
SGSDPMKTSV TSFRLGIAAY IVPFMFFYAP EILTHDNLLK LILHSFTALI GIIALSCAAQ
RFYFGRLNVP LAVVMFVTAV SLVSPNLYLG GAGLAVLAGL FFYQRYYRRR NDQAPGAPAV
AG
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