Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1238 |
Symbol | |
ID | 6025896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1297244 |
End bp | 1298377 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641594054 |
Product | TPR repeat-containing protein |
Protein accession | YP_001717381 |
Protein GI | 169831399 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTTGGG TATTGATAAG GAACCCGTGG ACACGGGCCA AGAACGGCAT CCGGCGCTTG AATGTCTGGC ACCGGTCCAG CCGGATGGCA CGGCGCCTGG GCGCGGAGCG GACGGCGGTA CGCTTGCTGG AACGGGCGCT CGAGGCCCAG CCGGACCGTG GGGACCTGCA CCTGGATGCC GCCCGCTACT GTCTGAAGAT GGGACAGTTG GAGAAGGCGG CCTGGCACTG CCGGCGGGCG AACCTGCTGA TTGACGAGAA CTTCATCCAG TGGCTGGAGC GGGTCTGCCG GGAGGACGAC GGGGCCGTCA TCGGGGACCG TTTTGCGGCC CTAGGGGCGC TGGGGAATTG GTATTTTCAG ACCGGTGACT TCGAAAAGGC AATTGAGTAT TACTCCCGGG CGCTCAGCGG GGGACGGATA GACGCCACGG TGCTGAACAA TAAGGGTCTG TGCCTGCTCC ACCTGGACCG GGACCAGGAG GCGCTGTCTC TTTTTCAACA AGCGCTGGCC CAAAGGACGA CGCCGGAGAT ACTGGTGAAC ACCGGGCTGG CTCTAAACCG CCTGAGACGC TATCCGGAAG CCCTGAGCTG CTACGAAAAG GCCCAGCGGA AGAACCATTC CTCTCTGGAA CTTCTGATCA ACAAGGGATA TGCCCTGTTC CACCTGAAGC GGTACGACGA GGCCGTTGTC TGCTTCGAGA TGGCTCAAGC CGTGACCCCT CAGGATACCG TCGTTTTGAA TAACCTGGCG GCCTGCTACC TGAAACTGGG TCGGTTTGAA GCGGCCGCCG CCTGCTACCG CACCGCGCTC GAAAGCGCAC CGCACGATGC GGCCCTGCAC AACAACTACG GCCTCTGCCT GGAGCGGCAG CGGCAGTATG CCGAGGCGCT GAACCATTAT GAGCGCGCTC TCGAACTAGA CGACAAGGAA CGGGAGACCT TTCTGGCGAA CAAAGCGCAG TGTCTGGTCC GGCTCGGACG CCACGAAGAG GCGAACGCCA TCTGCGACCG GTTGTTGCAG GAAGCTCCCG AGAACCGTCT GTACTGGGGC CTGAAGGCCG ATGTGCTCGT TGCTGCGGGC GCCGAAGACC AGGCGATTGA TTTCTATAAC CGGGCCCTGG GTCTCACCGG TTAA
|
Protein sequence | MRWVLIRNPW TRAKNGIRRL NVWHRSSRMA RRLGAERTAV RLLERALEAQ PDRGDLHLDA ARYCLKMGQL EKAAWHCRRA NLLIDENFIQ WLERVCREDD GAVIGDRFAA LGALGNWYFQ TGDFEKAIEY YSRALSGGRI DATVLNNKGL CLLHLDRDQE ALSLFQQALA QRTTPEILVN TGLALNRLRR YPEALSCYEK AQRKNHSSLE LLINKGYALF HLKRYDEAVV CFEMAQAVTP QDTVVLNNLA ACYLKLGRFE AAAACYRTAL ESAPHDAALH NNYGLCLERQ RQYAEALNHY ERALELDDKE RETFLANKAQ CLVRLGRHEE ANAICDRLLQ EAPENRLYWG LKADVLVAAG AEDQAIDFYN RALGLTG
|
| |