Gene Daud_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1238 
Symbol 
ID6025896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1297244 
End bp1298377 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content62% 
IMG OID641594054 
ProductTPR repeat-containing protein 
Protein accessionYP_001717381 
Protein GI169831399 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTGGG TATTGATAAG GAACCCGTGG ACACGGGCCA AGAACGGCAT CCGGCGCTTG 
AATGTCTGGC ACCGGTCCAG CCGGATGGCA CGGCGCCTGG GCGCGGAGCG GACGGCGGTA
CGCTTGCTGG AACGGGCGCT CGAGGCCCAG CCGGACCGTG GGGACCTGCA CCTGGATGCC
GCCCGCTACT GTCTGAAGAT GGGACAGTTG GAGAAGGCGG CCTGGCACTG CCGGCGGGCG
AACCTGCTGA TTGACGAGAA CTTCATCCAG TGGCTGGAGC GGGTCTGCCG GGAGGACGAC
GGGGCCGTCA TCGGGGACCG TTTTGCGGCC CTAGGGGCGC TGGGGAATTG GTATTTTCAG
ACCGGTGACT TCGAAAAGGC AATTGAGTAT TACTCCCGGG CGCTCAGCGG GGGACGGATA
GACGCCACGG TGCTGAACAA TAAGGGTCTG TGCCTGCTCC ACCTGGACCG GGACCAGGAG
GCGCTGTCTC TTTTTCAACA AGCGCTGGCC CAAAGGACGA CGCCGGAGAT ACTGGTGAAC
ACCGGGCTGG CTCTAAACCG CCTGAGACGC TATCCGGAAG CCCTGAGCTG CTACGAAAAG
GCCCAGCGGA AGAACCATTC CTCTCTGGAA CTTCTGATCA ACAAGGGATA TGCCCTGTTC
CACCTGAAGC GGTACGACGA GGCCGTTGTC TGCTTCGAGA TGGCTCAAGC CGTGACCCCT
CAGGATACCG TCGTTTTGAA TAACCTGGCG GCCTGCTACC TGAAACTGGG TCGGTTTGAA
GCGGCCGCCG CCTGCTACCG CACCGCGCTC GAAAGCGCAC CGCACGATGC GGCCCTGCAC
AACAACTACG GCCTCTGCCT GGAGCGGCAG CGGCAGTATG CCGAGGCGCT GAACCATTAT
GAGCGCGCTC TCGAACTAGA CGACAAGGAA CGGGAGACCT TTCTGGCGAA CAAAGCGCAG
TGTCTGGTCC GGCTCGGACG CCACGAAGAG GCGAACGCCA TCTGCGACCG GTTGTTGCAG
GAAGCTCCCG AGAACCGTCT GTACTGGGGC CTGAAGGCCG ATGTGCTCGT TGCTGCGGGC
GCCGAAGACC AGGCGATTGA TTTCTATAAC CGGGCCCTGG GTCTCACCGG TTAA
 
Protein sequence
MRWVLIRNPW TRAKNGIRRL NVWHRSSRMA RRLGAERTAV RLLERALEAQ PDRGDLHLDA 
ARYCLKMGQL EKAAWHCRRA NLLIDENFIQ WLERVCREDD GAVIGDRFAA LGALGNWYFQ
TGDFEKAIEY YSRALSGGRI DATVLNNKGL CLLHLDRDQE ALSLFQQALA QRTTPEILVN
TGLALNRLRR YPEALSCYEK AQRKNHSSLE LLINKGYALF HLKRYDEAVV CFEMAQAVTP
QDTVVLNNLA ACYLKLGRFE AAAACYRTAL ESAPHDAALH NNYGLCLERQ RQYAEALNHY
ERALELDDKE RETFLANKAQ CLVRLGRHEE ANAICDRLLQ EAPENRLYWG LKADVLVAAG
AEDQAIDFYN RALGLTG