Gene Daud_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1229 
Symbol 
ID6025586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1289372 
End bp1291393 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content61% 
IMG OID641594045 
Producttranslation elongation factor G 
Protein accessionYP_001717372 
Protein GI169831390 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0505633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAACT ACGAGGCAGG ACGGATTCGG AACGTGGGCT TGATTGCCCA CGGAGGGGCG 
GGAAAGACCT CCCTGGTAGA GGCGATGCTT TTTAACACCG GCGTCACCAC CCGCATCGGG
CGCGTGGAGG ACGGCACAAC GGTAGGGGAT TATCACCCGG AGGAGATCAA GCGCGGGATG
ACCATCCACA CCAGCATCAT CCCCGTGGAA TTGGACGGAA TCAAGCTGAA CATACTGGAC
ACCCCCGGAT TTTTGGATTT TATCGGCGAT GTGAAGGCCG CGCTACGGGT GGTCGACGGG
GCGCTGGTCG TCGTCAGCGC TGTAGACGGC GTTGAGGTCA TGACCGAGAT CACCTGGGAT
ATCGCTGCCG AACGAGGTCT TCCCCGCATG GTCTTTATCA ACAAACTGGA TCGGGAAAAC
GCCAACTTTT TCAAGGTGTT AGACGAGCTG AAGGAGAAAT TCGAGGCCGG TTTCGTGCCG
TTTCAGATTC CGATCGGCAG TGCGGAAACG TTCGAGGGCG TGGTCGACGT GGTGGGCGGC
AAGGCCTTTA AATACACAAA CGGAAAACGT GAGGAGATAC CGGTGCCTGA GAATCTGCAA
CCCGTGGCGG AGGAATACCG GGAGCAGTTG ATCGAGGCCG CCGCCGAGGC GAACGACGAT
TACCTCACCA AGTACCTGGA GGGTGAAGCC CTCACCCCCG AAGAAGTGAA CCTGGGACTG
GCCGAAGCGT TCCGGGCTGG CAAACTCGTG CCGGTTTTCA CCGGGTCGGC GGTCAAGAAC
ATCGGGGTGG ACCTGATCAC GGCCGCGGCG GCCCGGTACT TCGGGCCTCC CGCAGTGGAA
GCCGGGAAAC AGCTGGCCGC ACTGGTGTTC AAGACTCTAA CCGACCCCTA CGTCGGGCGG
ATGAACTTCG TCCGGGTTTA TTCGGGAGAC CTGAAGAGCG ACAGCACCGT CTACAACGCA
AACAAGGGGA AGACCGAAAA GATCGGGCAG GTGTTATACG TACGGGGCAA GAACCAGCAG
GGCGCGGAGG CGGCGCCGGC CGGAGACATC TGCGTGCTGG TGAAGCTCCA GGAAACGGGC
ACGGGCGATA CCCTGACCAC CAAGGACAAC CCGGTGATCC TGGATGGGAT CGACTTCCCG
GCACCGACGC TGTCCCTGGC CATCAGCCCG AAGAGCAAGG GCGACGAGGA CAAGCTATCC
ACGGCGCTGG CCCGGATTGT CGAGGAGGAA CCGACCGTTC AGATCAAGAA GAGCACCGAA
ACGAAGCAGA CCGTCATCAC CGGAATGGGC GAGGCCCAAC TGGACATCAT CGTTGACCGG
TTCAAACGGA AGTACGGGCT GGACGTGGTG CTCGAACCGC TGCGGATCCC TTACCGGGAG
ACCATCCGCA CCGAAACCAA AGTTGAAGGG AAATACAAGA AACAGACGGG CGGCCGCGGG
CAGTACGGGC ACGTTTGGAT CCGCCTGGAG CCCCTGACCG ACGGCAGCGA CTTCGTTTTC
GACGAAGAGG TGTTCGGCGG TTCGGTGCCC GCCGGGTTTT TCCCGGCGGT GGAGAAGGGC
ATCCGGGAAG CCATGCAGGA GGGCGTGGTG GCCGGTTACC CGACCACCGG CATCAAGGCG
GTGCTGTATG ACGGTTCGTA CCACCCGGTG GACTCCTCGG AAATGGCTTT CAAGATCGCG
GCCTCGATGG CCTTTAAGAA GGGCGTGCTG CAGGCCCAGC CGGTGCTCCT GGAACCGATT
ATGGAGGTGG AGGTGACGGC ACCGGAGGGG TTTATGGGTG ACATTATCAG TGACCTGAAC
GGGAAGCGCG GTCGTATCCT GGGGATGGAG CCGGAAGGGA AGCGGACCAG GATCCGGGCC
CACGTTCCGT TGGGCGAATT GGCACGGTAC GCCATCGACC TGAAGGCCAT GACCCAGGGC
CGGGCGTCTT TCACTATGCA GTTCAGTTCC TATGAGGAAA TGCCCGCCCA CCTGGCGGAA
AAGGTGATCA AGCAGGCCCA GGAAGCCGCC GAAAACAAGT AA
 
Protein sequence
MKNYEAGRIR NVGLIAHGGA GKTSLVEAML FNTGVTTRIG RVEDGTTVGD YHPEEIKRGM 
TIHTSIIPVE LDGIKLNILD TPGFLDFIGD VKAALRVVDG ALVVVSAVDG VEVMTEITWD
IAAERGLPRM VFINKLDREN ANFFKVLDEL KEKFEAGFVP FQIPIGSAET FEGVVDVVGG
KAFKYTNGKR EEIPVPENLQ PVAEEYREQL IEAAAEANDD YLTKYLEGEA LTPEEVNLGL
AEAFRAGKLV PVFTGSAVKN IGVDLITAAA ARYFGPPAVE AGKQLAALVF KTLTDPYVGR
MNFVRVYSGD LKSDSTVYNA NKGKTEKIGQ VLYVRGKNQQ GAEAAPAGDI CVLVKLQETG
TGDTLTTKDN PVILDGIDFP APTLSLAISP KSKGDEDKLS TALARIVEEE PTVQIKKSTE
TKQTVITGMG EAQLDIIVDR FKRKYGLDVV LEPLRIPYRE TIRTETKVEG KYKKQTGGRG
QYGHVWIRLE PLTDGSDFVF DEEVFGGSVP AGFFPAVEKG IREAMQEGVV AGYPTTGIKA
VLYDGSYHPV DSSEMAFKIA ASMAFKKGVL QAQPVLLEPI MEVEVTAPEG FMGDIISDLN
GKRGRILGME PEGKRTRIRA HVPLGELARY AIDLKAMTQG RASFTMQFSS YEEMPAHLAE
KVIKQAQEAA ENK