Gene Daud_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1215 
Symbol 
ID6027154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1273285 
End bp1275639 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content60% 
IMG OID641594030 
Productcopper amine oxidase domain-containing protein 
Protein accessionYP_001717358 
Protein GI169831376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000445409 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTT CACATTGCAT GTTGCTGAGC TTGGCGATAT CTCTCAGCTT GGCCTTGGCC 
TTTGCCGGTA CCGCTTTCGC GGCCACCACG AACTCGGCGC TCTGGCGCCC GAACGTGAGT
CCGGAGAGCA CAGCGCAGCT CGGTTCCTTG CGCATTTTGG AAAGTGCCGG AGGGAGTCTA
AAAGAAGGCG ACTGGGTGAA CATCAGCCTA CCTTCATATG TCGAGTTGGA GCGGTTTAGG
GTTGGCACGG GAACTTCTAC TGCTACGGAT CTGATCATTA TTTCTCCTCC GGTTACGGTG
GATGTTTCCG ATGCCGGTTT CACTGTTTCT ACGGTAGCAA ATACGGTTTA CGCCTTTGGC
CAGGAGGCTC CGCTCAAGGC AGGAGAGTTA AATATAGCTG TGCTGAGTAA AAATAGCTTT
AACCTCATAG TTAGAAAAGC CTGGAGTCCT TTCACTACAT TAACTTTAAG GGCGGTTGTT
TCGTTCGATC GGGTCAAGAT CGGGCCCGTA ACTCCTGAAG ACCTCGAAAC CTCCGACATT
AGGGTCACGC TCGACGCGCC CTCGACCTCC GGTTTCTCTT CCGGAACGGT GGCCGTGGGC
ACGCTCCTTA CGGCTGCCGG GAGCACCATC ACCGCGGCTG CGCCGACCAA TATCACCGAT
GTTGGGGGGA AGATCGCCGA CATCACCCTG AAGGAAGACG TGGCCGGGGC GCTGAAAAAG
AACGATGGCG TTTTCCCTCA AGGTAACACG GTGAAGCTCG TTTTGAGTCC CGGCTTCACC
TGGGACGCCG TGACTCTCAT CCCGCAGGGG GGATTCGCCA GTGGTAGTGT CGGTTATGCC
GTTCATACCG AGAAGGACGG GCGTAGCGCG CTTTACTTAG AGATTAAAAC GGCCACCGCT
GATCGCCCCG GGCAATTAGT CATCAAAGAA GCCTCGGTCA AGGCGAACGA GCCCTTCAGC
ACGGTCCGTG ATGTGAAGGT CACCTACGGC GGGACCAACC CCGGCGTGGG CGGCGAGAAA
ATAGCCGAGG TGACGGTGGC CAAGTACCTC GTGTCCGGGT TGACGTCCGC GGCCAAAAGC
ACCCTCGACG CGGTGGCCGG TAGGAAAAAC CAGCAGATCG GGAACTTCAC CATCGCCGAA
GGGATGCCGG GGGACCTGCC CAGCGGGAGA TTGATCAGCC TTACTCTCCC CGAGGGGGCG
AAGTGGAACC GGCGGCCTGA TGTCACCCGT GAGGCAGGCA ATGGCCAGCT TGTTTACCAC
AGCACGCGCG ACGAGGGGCG GACGCTGGTT TACTCCGTCT CCCAGGGTAG CACCAGCCGG
ACGGTCTTCT GCTTCAAGAA CGCCACCGTG GACCTGGCGG TGTCTGTGCC GGAGGAGTTG
AAGGTCACGG TAAAGGGCCC CGGTATTGAG GAGAGTGTCG CCGTGGCCAA CGTCCAGGCG
CCGGTAACGC TTTCCGCCGG GGGCGGCACG GTTCGGATCG GAGTACGGGA GCAGCCGGTG
GGGGTGATTA CCATCCAGGA GAACCTGGTC GGGGCGCTGC GGGCGCGCGA CGCCGCCGGG
AACCGGGCGG TCTTGAAGCT CACTCTGCCC TCAGGGGTGT ACTTCGCCCG GAAACCCACG
GTGGCGGTGA CGGCGGGGGA TCTCGAGCTT GGTGACGACA TAAGACTTGA GGATAACGAC
CGTACGCTGG TCATTCCGGT GAAGCTCTCG AGCGCAACCA CGGTGGAGAA GCCGGCCACC
ACCGGTGGAG AGAGCGGCGC CGAGAATACC ACCGGCACGG TTTCGGAGCA GGTGGGGAGC
ACGCTCACCG TGAAGGAGAT TCTTCTCACG GTGGACCGCA TGGCGCCGGA TGGAGACATC
ACCGTCAAGG TAACCGGCAG CGCCCTAAGC GAAACGTCGG GCCTCTTTTC TCCGTCATTT
AACGAACTGG CCTTGGTCCT GGCCCGGATC GCCGAAAAAA CCGAAAAGAC GGTCAGGCCG
GAGGCGGTCT TTACCATCGG CAGCAAGAAA TACCGGGTCG GGAACGAAGA AAGGGAGATG
GACGTAGAGC CCTACATCAA GAACGGCAGG ACCTACGCCC CGATACGTTA CCTGGCCGAT
GCGGCGGGGA TCGCCGACAG CTTCATCCTT TGGAGCGCGC AGGACCGGAC CGTGACGGTC
ATCGTTCCCG GGGGACGGGT AGTCCAGTTC AGAGTGGGGC AAAAGGCCTA TCTGTTACAG
GGCGTACCCA TCTCTATCGA CGTGGCGCCG GAGATCGTCA ACGGCCGGGT GATGCTCCCT
TACCGGTTTG TGTCCCAGGC GCTCGGGCTC GAAGCCCGTT GGGACGCTGA AACCCGGCAG
GTGGTTATCC GTTAG
 
Protein sequence
MKRSHCMLLS LAISLSLALA FAGTAFAATT NSALWRPNVS PESTAQLGSL RILESAGGSL 
KEGDWVNISL PSYVELERFR VGTGTSTATD LIIISPPVTV DVSDAGFTVS TVANTVYAFG
QEAPLKAGEL NIAVLSKNSF NLIVRKAWSP FTTLTLRAVV SFDRVKIGPV TPEDLETSDI
RVTLDAPSTS GFSSGTVAVG TLLTAAGSTI TAAAPTNITD VGGKIADITL KEDVAGALKK
NDGVFPQGNT VKLVLSPGFT WDAVTLIPQG GFASGSVGYA VHTEKDGRSA LYLEIKTATA
DRPGQLVIKE ASVKANEPFS TVRDVKVTYG GTNPGVGGEK IAEVTVAKYL VSGLTSAAKS
TLDAVAGRKN QQIGNFTIAE GMPGDLPSGR LISLTLPEGA KWNRRPDVTR EAGNGQLVYH
STRDEGRTLV YSVSQGSTSR TVFCFKNATV DLAVSVPEEL KVTVKGPGIE ESVAVANVQA
PVTLSAGGGT VRIGVREQPV GVITIQENLV GALRARDAAG NRAVLKLTLP SGVYFARKPT
VAVTAGDLEL GDDIRLEDND RTLVIPVKLS SATTVEKPAT TGGESGAENT TGTVSEQVGS
TLTVKEILLT VDRMAPDGDI TVKVTGSALS ETSGLFSPSF NELALVLARI AEKTEKTVRP
EAVFTIGSKK YRVGNEEREM DVEPYIKNGR TYAPIRYLAD AAGIADSFIL WSAQDRTVTV
IVPGGRVVQF RVGQKAYLLQ GVPISIDVAP EIVNGRVMLP YRFVSQALGL EARWDAETRQ
VVIR