| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1213 |
|---|
| Symbol | |
|---|
| ID | 6026463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1271424 |
|---|
| End bp | 1272353 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641594028 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001717356 |
|---|
| Protein GI | 169831374 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.715047 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCTGTTG GACAGCAGGC GGCCGCGGCC CTTTCCTCGC CGGATGGGGA GCCCGCGGTT
CCGGAGATGG CGTGGCCCGA AGCGGCGGCC CTAGTGGTGC GGCAGGTGGC CAAGCGGTAC
GGCCCGGTCA CCGCGGTGGA CGGGGTGAGC TTCGTCGTCC GCCGGGGCGA GATCTTCGGG
CTTTTGGGCC CCAACGGGGC CGGCAAGACC ACGCTCATCC GGATGCTCAC CACGCTCACG
CGGCCCACGG CGGGGGAACT CTTTGTGGGC GGGGAAAGTG TGTCTAAAAA CCCGGTGGCG
GTGAAGAAGC TCATCGGCGT GGTGCCGCAG GTGAACAACC TGGAGCGGGA GCTGACGGGC
CGGGAGAACC TGGTACTCCA CGCGCTTCTT CACCGCATGC CCCGGGGCGA CCGCGACCGG
CGGGTTCAGG AACTCCTGGA CTACGTGGGT CTGGACGGCC GGGCAGACGA CCGCGTCCAG
CACTACTCCG GCGGAATGGC CCGGCGGCTT CTCATTGCGC GGGCGCTCAT GCACCGGCCG
CCCATTCTGT TCCTGGATGA GCCAACGGTG GGGCTCGACC CGCAGACCCG GCGAAAGATC
TGGGATCTGA TCCAGGTCAT GAACCGCAGC GGCGTCACGG TGCTGCTCAC CACCCACTAT
ATTGAAGAGG CGGATAGCCT CTGCCACCGT GTCGGGATCA TCGACCGGGG AAAGCTGATC
GCCCTGGGGA CGCCGCGGGA GTTGAAGGAC AGGCTGGGTT CATTCTGTGT GGAGTGTTTT
GCCGGGGAGG GCACGCGGCG GGTCTTTTTC CCCGCGCGCC AGGACGCCAA GGCGCACGCC
GGCACCCTTG CCGGCGATGT AACCGTCCGG CGCACGAATC TGGAGGACGT CTTTGTGGAG
CTCACGGGCC GGGAGATCCG GGGCGGGTAG
|
|---|
| Protein sequence | MSVGQQAAAA LSSPDGEPAV PEMAWPEAAA LVVRQVAKRY GPVTAVDGVS FVVRRGEIFG
LLGPNGAGKT TLIRMLTTLT RPTAGELFVG GESVSKNPVA VKKLIGVVPQ VNNLERELTG
RENLVLHALL HRMPRGDRDR RVQELLDYVG LDGRADDRVQ HYSGGMARRL LIARALMHRP
PILFLDEPTV GLDPQTRRKI WDLIQVMNRS GVTVLLTTHY IEEADSLCHR VGIIDRGKLI
ALGTPRELKD RLGSFCVECF AGEGTRRVFF PARQDAKAHA GTLAGDVTVR RTNLEDVFVE
LTGREIRGG
|
|---|
| |