Gene Daud_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1206 
Symbol 
ID6026337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1261472 
End bp1262203 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID641594021 
ProductABC-2 type transporter 
Protein accessionYP_001717349 
Protein GI169831367 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR01291] ABC-2 type transporter, NodJ family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCT ACACGGTGTT TTGGCGCGAG ATGCTGGTTT TTAAGCGTAC TTTTTGGAAG 
TTCCTCGCCT CGAGGTTGGT CAGCCCCGTC CTGTACCTGG TGGCCTTTGG CTGGGGCCTA
GGCCGGAGCA TCCATACCGA CGGGGGGTCT TACCTGGATT TCGTCGTCCC GGGGATCATC
GCCCTCAGCG CGATGACGGT GAGCTTCAAT GCCACCGGGG TCTCGCTCAA TATGAGCCGT
CTTTACCACA AGACGCTGGA GGAATATCTT ATCGCGCCCA TCAGCAGCCT TTCCTTTGTC
CTGGGCAAGG TGCTGGCCGG GATGGTACGG GGGCTGGTCG GCGCGCTGGT GATCCTGGGT
CTCGGCACCC TTTTCGGTGC CCATCCGGTT ATGGGACCGT GGTTTTTTGC CGTCATATTT
CTTACCTGTT TCCTGTTCGC CGCATTGGGC GTCGTGGCGG CCATGACCGT CCCTTCACAC
GAGGACATGG CCAACTTTAG TACCTTTGTG ATTCTGCCCA TGGCCTTTCT GTGCGGCACC
TTTTTCCGAA CGGAACACTT GCCGGGCATC ATGGCCGATG CGGTCTATGC CCTGCCGCTG
ACTCACACCA GTTACGCCCT GCGCTCCCTG GCTGGCGGCG CGGGTTTGCC GGTTTCCTCC
CTGCTCATCT TGGTTGCCTA CGCCACGGTC TTTTTCTCAG CGGCGGTGTG GGTTACCCGC
CGGATACGGT AG
 
Protein sequence
MDSYTVFWRE MLVFKRTFWK FLASRLVSPV LYLVAFGWGL GRSIHTDGGS YLDFVVPGII 
ALSAMTVSFN ATGVSLNMSR LYHKTLEEYL IAPISSLSFV LGKVLAGMVR GLVGALVILG
LGTLFGAHPV MGPWFFAVIF LTCFLFAALG VVAAMTVPSH EDMANFSTFV ILPMAFLCGT
FFRTEHLPGI MADAVYALPL THTSYALRSL AGGAGLPVSS LLILVAYATV FFSAAVWVTR
RIR