| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1204 |
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| Symbol | |
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| ID | 6025550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 1258401 |
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| End bp | 1259723 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641594019 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001717347 |
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| Protein GI | 169831365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.313013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTGC ACGGCACCAT GCGGGTAAAC GAAAAAGGGC ACCTGGAAAT CGGGGGCTGT
GACGCGGTCG ATTTGGTCCG GGTTTTCGGA ACGCCGCTTT ATGTATTGGA TGAAGCACTG
TTCCGGGAAA ACTGCCGGTT GTACCGTGTG GCGTTCGCCA GGGGCGGCGG CGGGGTGCTC
TACGCCGGGA AGGCCCTTCT GACACTGGCC GTCTGCCGGT TGGTCGAGGA AGAGGGGTTG
GGTCTAGACG TCGTCTCCGG CGGCGAACTC TACACCGCCG TCCAGGCCGG TTTCCCGATG
GACCGGGTTT ATTTCCACGG AAACAACAAG ACGGCCGACG AAGTGCGGAT GGCGCTTAGT
GCCGGCGTGC ACCGGTTCGT ATGTGACAGT TTCGATGAAC TCGATCTGCT GAGCCGCTTG
GCGCTGGAAC TCGGAAAAGA ATGTAACCTG CTACTGCGCC TGACTCCCGG GATTGAGGCC
CACACCCACG ATTACATCCG GACCGGGCAG ATCGACTCGA AGTTCGGTTT GGCCATTCCG
AACGGTCAGG CGCTGGAAGC GGTCCGCCGC TGCCTGGAGC GGCCGGCCTT GAAGCTGCGC
GGCCTGCACT GCCACATCGG CTCCCAGATC TTCGAGTTGG AACCGTACGC CGACGCCGCC
CGGATCTTGA TGGAGTTCGC CCGCCAAGTG CGGGACGTGA CGGGCTGGGT GATCGAAGAA
CTCGACCTGG GCGGCGGGCT GGGTATCTAC TACAGTCCGG GGGACGACCC TCCGGCCGTT
GAGACCCTGG CCGAAACCAT CTTTGGCGCG GTCGCGCAGG CCGCGGCGAG CGAAGGTCTG
CCCATTCCTA AAGTGCTAGT CGAGCCCGGA CGATCCATCG CCGGCCCGGC GGGGACCACG
TTGTATACCG TGGGGACGGT CAAAGAGATT CCGGGTGTCC GGACCTACGT GGCGGTGGAC
GGCGGGATGG GAGACAACCC CCGTCCGGCT CTGTACGGGG CACGGTATGA GGCGTGCCTG
GCCAACCGGA TGAACGGACG CCTGGACACT CTGGCCGTGT CGCTGGCCGG CCGGTGTTGT
GAATCGGGGG ACCTGTTGAT TCGGCAGGCG GACCTGCCGC CGGTGCGGGT CGGTGACGTG
GTGGCCGTGA GTTGCACCGG GGCTTACACC TACTCGATGG CGAGCAACTA CAACCGGTTT
CCTCGCCCGG CGATGGTTCT GGTCCGGGAT GGGAGCGCCG AGTTGATTGT GCGCCGGGAA
AGTTACGCCG ACTTGATCCG GAACGATATC GTGCCGGTGC GATTTCGGAC CAGACAAGCA
TAG
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| Protein sequence | MRLHGTMRVN EKGHLEIGGC DAVDLVRVFG TPLYVLDEAL FRENCRLYRV AFARGGGGVL
YAGKALLTLA VCRLVEEEGL GLDVVSGGEL YTAVQAGFPM DRVYFHGNNK TADEVRMALS
AGVHRFVCDS FDELDLLSRL ALELGKECNL LLRLTPGIEA HTHDYIRTGQ IDSKFGLAIP
NGQALEAVRR CLERPALKLR GLHCHIGSQI FELEPYADAA RILMEFARQV RDVTGWVIEE
LDLGGGLGIY YSPGDDPPAV ETLAETIFGA VAQAAASEGL PIPKVLVEPG RSIAGPAGTT
LYTVGTVKEI PGVRTYVAVD GGMGDNPRPA LYGARYEACL ANRMNGRLDT LAVSLAGRCC
ESGDLLIRQA DLPPVRVGDV VAVSCTGAYT YSMASNYNRF PRPAMVLVRD GSAELIVRRE
SYADLIRNDI VPVRFRTRQA
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