Gene Daud_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1202 
Symbol 
ID6026869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1254984 
End bp1255658 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content60% 
IMG OID641594017 
Productpeptidase M50 
Protein accessionYP_001717345 
Protein GI169831363 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.923979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAGA TGAATCCGGT TATCGCCGTC CTGGTTATCG TGATCGGCGT GGTTTTTCAC 
GAAGTCGCGC ACGGCTGGAC GGCCAAGCGA CTCGGCGACA GGACCGCCGA GAACGCCGGA
CGCCTGACGC TGAACCCAAT CCCGCACCTG GACCCGGTCG GGTCAATCAT TGTCCCGGCG
GCGCTGGTGC TCCTGAACGC CGGCGTGGTC TTCGGCTGGG CGAAACCAGT ACCGGTGAAC
CCCTACAACT TCCGGGGAGA CATCAAGCGG GGGATGATGC TGGTTTCCCT GGCCGGTCCG
GGGTCCAATC TGCTGCTCGC AGCCGGCGGC GCGGTGCTCC TCGGCCTGTT CATGGGTTTC
CAGGGGTTTC AGCAGTTCTG GGAGGCAATC CGAACGTTGC CGGGCAGTTT TCTGTATGCC
CTGATCCAGA TTAACCTGGT GCTGGCTTTC TTGAACCTGC TGCCGGTTCC GCCGCTGGAC
GGCTCCAAGA TCCTGGCCGG GATTCTGCCT GGTCGGCAGG AATGGCTCTA CACCCTGGAA
AAATACGGCT TTGTAGTTTT GATTGTGCTG CTGGTTACCG GTGCCATCGG CGTTTACCTG
ACGGCGGTGG TCCTGCCTTC ATTTCAATTT CTCTTGAAGT TTGCGGCCAA TATCGCGCGC
TTCTTCGGAA GCTGA
 
Protein sequence
MFEMNPVIAV LVIVIGVVFH EVAHGWTAKR LGDRTAENAG RLTLNPIPHL DPVGSIIVPA 
ALVLLNAGVV FGWAKPVPVN PYNFRGDIKR GMMLVSLAGP GSNLLLAAGG AVLLGLFMGF
QGFQQFWEAI RTLPGSFLYA LIQINLVLAF LNLLPVPPLD GSKILAGILP GRQEWLYTLE
KYGFVVLIVL LVTGAIGVYL TAVVLPSFQF LLKFAANIAR FFGS