Gene Daud_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1187 
Symbol 
ID6025836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand- 
Start bp1242674 
End bp1243288 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID641594002 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001717330 
Protein GI169831348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00213067 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGG TTAAAATCTG CGGGATCACG GACCTTGATA CCGCCCGCAC GGCGGTCGAC 
GCCGGCGCCG ACGCCCTCGG CTTCGTGTTC GCCCCGGGGC GGCGCCGGAT CGCGCCGGAT 
ACGGCCCGCG CCATTATCCG GCGGTTGCCC CCCGAAGTGC TTACCGTGGG CGTGTTCGTG 
GACGAGGATC CGGAAACGGT GCAGGGAATC GCCGCGCACT GCGGGCTGGG TGCACTCCAG 
TTCCACGGGC GGGAGAGTCC GGAATACTGC CGGGGCTTCC GGGAGAAGGT GATCAAGGCT 
TTTGGGGTGG GGAACGCTTC CGTCAGGGAA CTGGAGCGGG CCGAGGAGTA CCCGGTGTGG 
TGTCTGCTGC TGGACACCTT TAGTCCGGGG CGGCCGGGCG GCACGGGGCG GGTGTTCGAC 
TGGAGACTCA TCGAGTCCCT GAAGTTCTCC CGGCCGGTCA TTCTGGCGGG GGGTCTCAAT 
CCCGGCAACG TACAGGCGGC GATCGCCGCC GTCCGCCCTT ATGGGGTGGA TGTTTCCACG 
GGGGTTGAAA CCGGGGGGTT GAAAGACCCG GCCAAAATCC GGAGTTTCAT CAAACTGGCA 
AGGGAGGCGC TATGA
 
Protein sequence
MTLVKICGIT DLDTARTAVD AGADALGFVF APGRRRIAPD TARAIIRRLP PEVLTVGVFV 
DEDPETVQGI AAHCGLGALQ FHGRESPEYC RGFREKVIKA FGVGNASVRE LERAEEYPVW 
CLLLDTFSPG RPGGTGRVFD WRLIESLKFS RPVILAGGLN PGNVQAAIAA VRPYGVDVST 
GVETGGLKDP AKIRSFIKLA REAL