Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1181 |
Symbol | |
ID | 6026533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1236018 |
End bp | 1237307 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641593996 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001717324 |
Protein GI | 169831342 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCCTGA AAATCACGCC GGCCCGTGGC CTGCGGGGTG AGGCTTGGGT CCCGGGGGAC AAATCCATTT CGCACCGGGT GGTGATGCTC GGCTCTCTGG CGCGGGGGGA AACGGCGGCT ACTAATTTCC TGCCCGGGGA GGACTGCTTG GCCACCGTGC GCTGCTTTCG GGCCCTCGGC GTGGAGATCG AGGGGCCAGA CGGGGACACC ATCCGGATTC GGGGCCGCGG GCCCGAGGCC CTGACCGAGG CCCCGGATGT TCTGGACGCC GGCAATTCCG GGACCACCAT GCGGCTGATG CTGGGTATCT TGGCCGGGCA GCCCTTTTTC AGCGTGATTA CGGGCGACGC CTCCCTGCGC CGGCGCCCGA TGGGTCGGGT GACCGGACCG CTGCAGGAGA TGGGCGCCAC CATACTGGGC CGCCGGAACG CGAACCTGGC CCCGATCGCC GTGGCCGGGG GGCGGCTTTC GGGTATCAGG TACCGGCTGC CGGTGGCCTC GGCCCAGTTG AAATCGGCCT TGCTCCTGGC CGGATTGTTT GCGGATAGTC CGACGGAGGT TACCGAACCG GTGGCAACCC GGGACCATAC CGAGCGGATG CTGGCCGCTT TCGGGGCACT GGTGGCACGC CGGGGTTCTT CGGTGACGGT TGCGCCCTCC CCAGAGCTGT GCGGGCGGGA GATCAGGATC CCGGGAGACA TCTCCTCGGC CGCCTTTTTC ATCGTCGCTG CCCTGATTAC GCCCGAGAGC GACCTGGTGC TGAAGGATGT GGGCGTTAAT CCAACCCGGA CCGGAATCCT TGATGCCCTG GCAAACATGG GGGCGCGAAT ATCCGTGAGC AGGCCCCGGG AAAGCGGCGG GGAGCCGGTG GCCGACATCC GGGTCCGGTC AAGCGCCCTG CGCGGCACGG TGATTGAAGG GGCACTGATT CCAAGGCTGG TTGACGAAAT TCCCGTCCTG GCGGTGGCCG CGGCGTACGC CGACGGGGAA ACGGTGATCC GTGACGCCGC GGAACTGAGG GTGAAAGAGT CCGACCGTTT GGCCGCAACC CGTAAGGAAC TGTCCACGCT GGGGGCCGAC ATCCGGGAGA CGCCTGACGG CCTGGTGATC CGGGGACCGC GGCGGCTCAC GGGAGGCAGT TGCAACAGTC ACGGCGACCA CCGCATTGCG ATGGCGGCCG CGGTTGCCGG TCTGGCCGCG TCGGACGTTA CCATCATCCG CGATTCCAAC TGCATTGACG TGTCTTTCCC CGGATTCGCC CACGCATTAA ATTCCCTGCG CCTAGAATAA
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Protein sequence | MTLKITPARG LRGEAWVPGD KSISHRVVML GSLARGETAA TNFLPGEDCL ATVRCFRALG VEIEGPDGDT IRIRGRGPEA LTEAPDVLDA GNSGTTMRLM LGILAGQPFF SVITGDASLR RRPMGRVTGP LQEMGATILG RRNANLAPIA VAGGRLSGIR YRLPVASAQL KSALLLAGLF ADSPTEVTEP VATRDHTERM LAAFGALVAR RGSSVTVAPS PELCGREIRI PGDISSAAFF IVAALITPES DLVLKDVGVN PTRTGILDAL ANMGARISVS RPRESGGEPV ADIRVRSSAL RGTVIEGALI PRLVDEIPVL AVAAAYADGE TVIRDAAELR VKESDRLAAT RKELSTLGAD IRETPDGLVI RGPRRLTGGS CNSHGDHRIA MAAAVAGLAA SDVTIIRDSN CIDVSFPGFA HALNSLRLE
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