Gene Daud_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1137 
Symbol 
ID6027179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1192663 
End bp1193385 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content61% 
IMG OID641593952 
ProductABC transporter related 
Protein accessionYP_001717280 
Protein GI169831298 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0546952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGG TTAGGGACCT TTACAAGGAC TTCAAGTCCC TGAAGGTGCT TCAGGGCATC 
AACTGCCGGG TGGCGGAGGG CGAGGTGGTC TGTGTCATCG GTCCCAGCGG CTCGGGCAAG
AGTACCTTCC TGCGCTGCCT GAACCTCCTG GAGGAGCCGA CCAGGGGCGA GATTATTATC
GACGGCGTCT CCCTCACCGA CAAGAGCACC AACATCAACA AGATGCGGCA GAAGGTGGGC
ATGGTGTTCC AATTGTTCAA CCTCTTCCCG CACAAGACGG CGCTGGAGAA CATCATGCTG
GCACCCCTCA AGGTGGCCCG CCTATCGCGG ACGGAGGCCG AAGAACGGGC CCGGTCGCTT
CTGGAGAAGG TGGGCTTGAA GGACAAGGCC GACAACTACC CCGGGCAGCT TTCGGGCGGC
CAGCAGCAGC GGGTGGCCAT CGCCCGCGCC CTGGCGATGC AGCCGAAAGT GATGCTGTTC
GACGAGTGCA CGTCCGCCCT GGACCCGGAA ATGGTCAAGG AGGTCCTGGC AGTGATGAAG
GACCTGGCGC GCGAGGGAAT GACCATGGTG GTGGTCACGC ACGAGATGGG TTTTGCACGC
GAGGTCGGTG ACCGGGTACT GTTTATGGAC GACGGGAAAA TCGTGGAAGA AGGTCTGCCG
TCGGAGATTT TCACCGCCCC CCGGGAGGAG CGCACCAAAG CGTTTCTCAG TAAGATCCTC
TAG
 
Protein sequence
MIEVRDLYKD FKSLKVLQGI NCRVAEGEVV CVIGPSGSGK STFLRCLNLL EEPTRGEIII 
DGVSLTDKST NINKMRQKVG MVFQLFNLFP HKTALENIML APLKVARLSR TEAEERARSL
LEKVGLKDKA DNYPGQLSGG QQQRVAIARA LAMQPKVMLF DECTSALDPE MVKEVLAVMK
DLAREGMTMV VVTHEMGFAR EVGDRVLFMD DGKIVEEGLP SEIFTAPREE RTKAFLSKIL