Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1127 |
Symbol | |
ID | 6026535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | - |
Start bp | 1183658 |
End bp | 1184365 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641593942 |
Product | ABC transporter related |
Protein accession | YP_001717270 |
Protein GI | 169831288 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.674727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTCTGG AACTGGACAA CGTCTCGGTC AACTACGGCA CCATTGAAGC CCTGACCGGC ATCTCGCTGA CGGTAAACGA AGGAGAAATC GTGGCCCTGA TCGGGGCGAA CGGTGCCGGG AAAAGCACCG CCCTCTGGAC CATCTCCGGA CTGATCCGCC CCCGGAGGGG ACGGATCGTG TTCGCGGGCC GGGACATCAC CCGGATGTCC CCCAGCCGGA TCGTGGCGCT GGGAATCAGC CACGTGCCGG AGGGGCGCCG GGTGTTCGCC ACCATGTCGG TGCAGGAGAA CCTCGAGATG GGCGCGTACG TGGCGAAAGG AGGCCGGAAG ACCCGTGAGG CTATGGAGCG GGTTTTCGGA CGCTTCCCGC GCCTTCTGGA GCGTCGCCGC CAGTTGGCCG GCACTTTGAG CGGCGGGGAA CAGCAAATGT TGGCCATAGG GCGGGCTTTG ATGTCCAGAC CCAAGCTCTT GCTGATGGAT GAGCCTTCCA TGGGCCTCGC ACCGATGCTG GTACGGGAAA TATTTTCCAT TATCAGGGAG CTTAACGAAC AGGGAACCAC CATTCTCCTC GTGGAGCAGA ATGCCCACAT GGCCCTGTCC GTCGCCCGGC GCGGCTACGT GCTGGAGACC GGACAGATCA CCCTCACCGG ACCGGCCGAG GAACTGGCCG GCAACCCGGA CGTGCGCCGG GCCTACCTGG GCGCTTAG
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Protein sequence | MLLELDNVSV NYGTIEALTG ISLTVNEGEI VALIGANGAG KSTALWTISG LIRPRRGRIV FAGRDITRMS PSRIVALGIS HVPEGRRVFA TMSVQENLEM GAYVAKGGRK TREAMERVFG RFPRLLERRR QLAGTLSGGE QQMLAIGRAL MSRPKLLLMD EPSMGLAPML VREIFSIIRE LNEQGTTILL VEQNAHMALS VARRGYVLET GQITLTGPAE ELAGNPDVRR AYLGA
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