| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1122 |
|---|
| Symbol | |
|---|
| ID | 6025839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1179227 |
|---|
| End bp | 1179739 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641593937 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001717265 |
|---|
| Protein GI | 169831283 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.421321 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAATATC CATCTATCCA TCGACCCCCT TGCTTTTGGC TTGCCGCCAG CTTATCATCA
TGGGTAAAAG AACATTGGGA GGTGTTCGCA ATGCGCAAGG AATTGTCCCC TTTTGACGGG
CTTGAACTGT TGATCAGAAA GCCCGTGAAG AGCCTTTTCC GCCTGTTGGA CGAGCCCTTC
GAGGAATTTG CCAAGTCCGC CGTGGACGTC TATGAAGAAG GCAACGATGT CGTAATCAAG
GCCGATCTGC CCGGATTCAA GAAAGAAGAG ATCCGCATTC AACTGGAGGA TAACACCCTG
TCCCTGGAGG CCAAGCGTGA GAAGGACGAG GAAGTGAGTG AAAGGAACTA CTACCGCAAG
GAGCGCCGTG AAGTATACGT GAGAGAGGCG ATCACCCTGC CGGCCGAAGT GGACCGGGAC
AAGGCGGCCG CCAAACTGGA AAACGGCGTG CTGATCATCC GGTTGCCCAA GACCGGCCCA
ACCAGGTCCG GAACGACAAT CAACATCGAG TAA
|
|---|
| Protein sequence | MKYPSIHRPP CFWLAASLSS WVKEHWEVFA MRKELSPFDG LELLIRKPVK SLFRLLDEPF
EEFAKSAVDV YEEGNDVVIK ADLPGFKKEE IRIQLEDNTL SLEAKREKDE EVSERNYYRK
ERREVYVREA ITLPAEVDRD KAAAKLENGV LIIRLPKTGP TRSGTTINIE
|
|---|
| |