| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1115 |
|---|
| Symbol | |
|---|
| ID | 6027229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1171929 |
|---|
| End bp | 1174721 |
|---|
| Gene Length | 2793 bp |
|---|
| Protein Length | 930 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641593930 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001717258 |
|---|
| Protein GI | 169831276 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1615] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGTGCCC GACGGTGGAC CTTTTACGCC GTAGTGGCGG CGATCGTGCT TTTCATCATG
CTGCTGGGGG GCGGAGCCCG GCTTTATACC GACTGGTTAT GGTTCCAGTC CTTGGGTTAC
AGCAACGTGT TTGTCACCAT CCTCCTCTCC GACCTCGGCC TCCGGGTCGC AGTTGGCCTG
CTGTTCTTTG CCTTCATATT CGTTAACCTG CTGCTGACCA GGCGGGTGGT CCTGGAACAG
GGCCACATCA CGCTCCAGCA GGAGAACGTG ATTCAACTGC AGGACATCCC TTGGAAGCAA
ATCCTGAACA ACCGGATCAT TACCTTGTTC TTCCTGGCCG TGAGCGCTGT GCTGGCCTAT
ATGTTCAGTC TGTCGGCGGC CGGGGACTGG GTGCTCCTCC AGAAGTTTTT GAACCCCTCT
TCTTTCGGGA TAGCCGACCC TATTTTCGGG AAGGACGTCG GGTTCTACGT CTTCACCCTG
CCGTTCCATA TTTTCCTCTT TAACATTCTC TTCTGGAGCG GTATCGTCAC TGTTTTGTTT
GTGGGCATCG CCTACTTCAT TTCCAACCCC TTCCAGGGCC TGCGGGGTCT GTTGGCCAAC
AGTCACGTAC GGACGCACCT TTCGGGCCTG TTGGCCTTCA TACTGCTGGT CAAGGCCTGG
GGTTACCTGC TCCAGCAGTA CCTCTTGCTC TACTCGCCCC GGGGCGTGGT GTTCGGCCCC
GGCTACACCG ACATCAACGG CACGCTACTG GCGTACCGGG TGCTGCTGAT CTTGGCCGTG
CTGGCCGCGC TGGCGGTGAT CGCGAACATC TTCCTGCGCC GGACGGGAGT TTTGGCCTAC
GCCGTGGGCG GCCTGATCGT GGTTTCCCTG GTGCTCGGTT TGGTTTACCC GGCGCTGCTG
CAGAGATTTG TGGTCGGGCC GAACGAACTG GCCCGCGAGG CGCCGTTCAT TGAACACAGC
ATCGCCTTCA CAAGGAAAGC GTACAACCTG GACCAGGTGG ACCGGAAGGC GTTCCCGGCG
GGACGCACGG TGGATCTGGA CGCGATCCAG GCGAACAGCG AGACGACCAG CAATATCCGC
CTCTGGGACC GGGAGCCGCT GCAGGCCAGC TACGGCCAAC TGCAGCAGAT ACGGACCTAC
TACGAGCTTA AACATATCGA CGTTGACCGA TATACGATCA ACGGTGTGTA CCGACAAGTC
ATGCTAGCTG CACGGGAACT GGATCAGAGC CGACTGCCCG AACAGGCCAA GACGTGGGTA
AACCAGAGGC TGATCTACAC CCACGGCTAC GGGGTGGCCA TGAGCCCGGT AAACGAGGTG
ACACGCGAGG GCCAGCCGGT GTTCTTACTC AAGGATATCC CGCCTAAAAC CGACACCGAC
ATTCACCTGG AGAGACCGGA GATCTACTTC GGCGAAGCCA CCGACAACTA TGTGATCGTG
AATACCGACC AGTTGGAGTT CAACTACCCC GAAGGCGAAA CCAACGTGCA CACCACTCAC
GCGGCAGCCG ACAGCGGGGT GACGCTGGGT TCGATCCTGA AGCGCCTCGT GTTCGCGGTG
GCCCTGGCCG ACTACAAGAT CATGCTGTCG ACGGACGTGC GGCCGGACAG CCGGATTCTG
TACTACAGGA ACATACGGGA ACGGGTGCCG AAGCTGGCGC CGTTCCTGAT GTTCGACCAA
GACCCGTACA TCGTGGTGAA CAACGGAAAA CTGTACTGGC TATGGGACGC CTACACAACG
ACTAACATGT TTCCCTACGC CGAGCCCTTC CAGGGCCGGA ACAACTACAT CCGGAACGCG
GTGAAGGTCG TGGTGGACGC CTACACCGGC GACGTCGACT TCTACGTGGC CGAACCCGAA
GACCCGCTGA TCCGGAGTTT CGCCCTGATC TTCCCGGACA TGTTCAAGGA AATAGATGAA
ATGCCGGCCA GCCTGCGGGC GCACATCCGC TACCCGGTCG ACCTATTCAA GGTGCAGGCC
GAGATGTACG CCACCTACCA CATGCAGAAC GCAGCTGTCT TCTATAACCG GGAGGACAAG
TGGAGCCTGC CGACCGAAAT CTTCGGGCAG GAAAAACGCC CGGTGGAACC GTACTACACC
ATCGTGCGGC TCCCGGGCGA GGAGGCCCCT GAATTCGTGC TGATTATGCC TTTCACTCCC
CATGGTCGCG AGAATATGAT CGGCTGGATG GCGGCCCGTT CCGATGGGGA ACACTACGGA
AATCTGCTGG TGTACGAAAT GCCCAAGCAG AGCCTGGTGT ACGGCCCGAT GCAGGTCGAG
GCCCGCATCA ACCAGGACCA ATACATCTCC CAGCAGCTTA CGCTGTGGGA GAACCGGGGT
ACGCGGGTGA TCCGGGGCAA CCTGCTGAGC ATCCCGATCG AGGACAGCCT GCTCTACATT
GAGCCGATCT ACCTGCAGGC CGAGGACGGC CGGATGCCCG AGTTGCGCCG GGTGGTGCTC
TTGCACGGTG AGCGCGTGGT ATTCGAACCC GACCTCCCGC GGGCCCTGGC CGCGATGTTC
GGGACGCCGG GCGCCCCCGG GGCGGCCCCG CCACCGGTAA CCGACCCTGA TGCCGGGCCG
CTGGACGAAG TCCCCGTGGT GCGCACCATG GCCGACCTGA TCGAGGAAGC GAACCGTGAA
TATGAACGCG CCCAGGAGCG CCTGCGCGAA GGAGACTGGA GCGGCTACGG CGCCGCCATC
AGCAACCTGG GCCGGGTGCT GGACGAACTG CTGAAACAGG CCGGGCAGGA GACACAGGAG
GTGGGGTCGG GGAGGCCCTA CGTTTTCCGG TGA
|
|---|
| Protein sequence | MGARRWTFYA VVAAIVLFIM LLGGGARLYT DWLWFQSLGY SNVFVTILLS DLGLRVAVGL
LFFAFIFVNL LLTRRVVLEQ GHITLQQENV IQLQDIPWKQ ILNNRIITLF FLAVSAVLAY
MFSLSAAGDW VLLQKFLNPS SFGIADPIFG KDVGFYVFTL PFHIFLFNIL FWSGIVTVLF
VGIAYFISNP FQGLRGLLAN SHVRTHLSGL LAFILLVKAW GYLLQQYLLL YSPRGVVFGP
GYTDINGTLL AYRVLLILAV LAALAVIANI FLRRTGVLAY AVGGLIVVSL VLGLVYPALL
QRFVVGPNEL AREAPFIEHS IAFTRKAYNL DQVDRKAFPA GRTVDLDAIQ ANSETTSNIR
LWDREPLQAS YGQLQQIRTY YELKHIDVDR YTINGVYRQV MLAARELDQS RLPEQAKTWV
NQRLIYTHGY GVAMSPVNEV TREGQPVFLL KDIPPKTDTD IHLERPEIYF GEATDNYVIV
NTDQLEFNYP EGETNVHTTH AAADSGVTLG SILKRLVFAV ALADYKIMLS TDVRPDSRIL
YYRNIRERVP KLAPFLMFDQ DPYIVVNNGK LYWLWDAYTT TNMFPYAEPF QGRNNYIRNA
VKVVVDAYTG DVDFYVAEPE DPLIRSFALI FPDMFKEIDE MPASLRAHIR YPVDLFKVQA
EMYATYHMQN AAVFYNREDK WSLPTEIFGQ EKRPVEPYYT IVRLPGEEAP EFVLIMPFTP
HGRENMIGWM AARSDGEHYG NLLVYEMPKQ SLVYGPMQVE ARINQDQYIS QQLTLWENRG
TRVIRGNLLS IPIEDSLLYI EPIYLQAEDG RMPELRRVVL LHGERVVFEP DLPRALAAMF
GTPGAPGAAP PPVTDPDAGP LDEVPVVRTM ADLIEEANRE YERAQERLRE GDWSGYGAAI
SNLGRVLDEL LKQAGQETQE VGSGRPYVFR
|
|---|
| |