Gene Daud_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1106 
Symbol 
ID6025588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1163061 
End bp1164230 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content61% 
IMG OID641593920 
Productglycosyl transferase, group 1 
Protein accessionYP_001717249 
Protein GI169831267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTGG CCATATTCAC CGACAGCTAC CGCCCCTACA CCAGTGGTGT GGTGCGCTCT 
ATCGAAACCT TCAGCGAGGA ATTGCTCGCC CTGGGCCACC AGGTCTATAT TTTTGCGCCG
CGTTACGGAC AGGTTCAGTC TCGGGAAGAG ACGATCTTCC GTTTCTATTC CGTGCCGTCC
CCGACCAACC CCGACTACAA CATCGCAATT CCGATTTCCC TGCGCCTGAA AGCCACCCTG
AAACAGCTTA AGGTGAACAT CATCCACGTC CATTCACCGT TCATGCTCGG CCGGCTGGGT
GCCCGTTGCG CACGGGATCT GGAACTCCCG CTCGTTTTCA CCTACCACAC CCTGTACGAC
CAGTATGTGC ACTACATCCC GGTAGCCCGC AACCTGACGC GGAAGATGAC CCAGAAACTC
TCCGTGCAGT TCTGCAACCG CTGCGACATG GTCCTCGTGC CCACCTGGGT GATCGGCGAG
TACATCCGCG GCCTCGGGGT GCAGGTGCCG GTAACCAAGC TTCCTAGCGG AATCAAGGTT
GAGGATTTCC AGCAGGGTGA CCCGCAGTGG CTTCGGGAAC GATACGGGAT CGGGGCGGAG
GAAAAGGTTC TTCTCTTTGT GGGCCGATTG GGGCAGGAAA AGAACATCGA ATTCCTCTTG
CGTGCCTACC GGCAGGTCCT TGACGGCCTG CCGCAAACGC CGGTCCGCCT GGTGCTGGTG
GGCGGCGGCC CGGAGACCGG GAACCTGAAG CTGATGGCAC AGGCGCTGGG GATCGCCGAG
CGCACGGTGT TCACCGGCCC GCTGGCCGGA CGAGATGTAG TGCACTGCTA TGCCGGGGCT
GACCTGTTTG TGTTTCCGTC CGTGACCGAA ACGCAGGGAC TGGTCATCGG AGAGGCGAAG
GCGGCCGGAG TGCCGGCCGT GGCGGTGGAC GCGTTCGGCG TCGCCGAGAT GGTCAGTCAC
GGCGAGGACG GGTTTCTGAC CAGCCTATCC GAGCAGGCTT TTTCCGAGAA AATACTCCTA
CTGTTGAACG ACGAAGGATT GCGCCGGAGA ATGGCCAGCA CCGCCCGGGA AAACGCCCGG
GAACTCTCCG CCAAGGTGCT GGCGGGCCAA CTAGAAAACG TGTACCGGCG CCTGATTGAA
CACCGGCTGC ACAAATCACA GGTGCGCTAG
 
Protein sequence
MRVAIFTDSY RPYTSGVVRS IETFSEELLA LGHQVYIFAP RYGQVQSREE TIFRFYSVPS 
PTNPDYNIAI PISLRLKATL KQLKVNIIHV HSPFMLGRLG ARCARDLELP LVFTYHTLYD
QYVHYIPVAR NLTRKMTQKL SVQFCNRCDM VLVPTWVIGE YIRGLGVQVP VTKLPSGIKV
EDFQQGDPQW LRERYGIGAE EKVLLFVGRL GQEKNIEFLL RAYRQVLDGL PQTPVRLVLV
GGGPETGNLK LMAQALGIAE RTVFTGPLAG RDVVHCYAGA DLFVFPSVTE TQGLVIGEAK
AAGVPAVAVD AFGVAEMVSH GEDGFLTSLS EQAFSEKILL LLNDEGLRRR MASTARENAR
ELSAKVLAGQ LENVYRRLIE HRLHKSQVR