Gene Daud_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1100 
Symbol 
ID6027366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1159018 
End bp1159443 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content58% 
IMG OID641593914 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_001717243 
Protein GI169831261 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.878145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGATTGA TCAACAAAGC CCGTGTGAAG TCACCTTGGA TCGTGCATTA CTGCGCCGGC 
AGTTGCAACG GTTGCGATAT TGAGATCCTG GCCTGTTTGA CGCCGTATTA TGACGTTGAG
CGGTTCGGCA TATTGAATAT CGGCAACCCT AAGCACGCCG ACCTGCTGGT GGTGACCGGG
CCGGCGAACA TGCGCTGCTC CCGGGTACTG AAAAACCTTT ACGATCAAAT GCCGGAGCCG
AAACTGGTAA TGGCGGTTGG GGCGTGTGCG GCCACGGGAG GCGTGTTCCA CAACTGCTAC
AACATCCTGG GCGGTATCGA CCGGGTGATC CCGGTGGACG TCTACGTCCC GGGGTGTGCG
GCCCGGCCGG AAGCCATTAT CGATGGCGTG GTGCTGGCGC TGGATAAGCT AAGTAACATC
AAGTAG
 
Protein sequence
MGLINKARVK SPWIVHYCAG SCNGCDIEIL ACLTPYYDVE RFGILNIGNP KHADLLVVTG 
PANMRCSRVL KNLYDQMPEP KLVMAVGACA ATGGVFHNCY NILGGIDRVI PVDVYVPGCA
ARPEAIIDGV VLALDKLSNI K