Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daud_1089 |
Symbol | |
ID | 6027346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Desulforudis audaxviator MP104C |
Kingdom | Bacteria |
Replicon accession | NC_010424 |
Strand | + |
Start bp | 1146549 |
End bp | 1147655 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641593904 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001717233 |
Protein GI | 169831251 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACTTCT GGTTCGTGGA CGATAGGCTC GAAGCGGTTG CCGGGAAGGT GCGGAATGGT GAGCGGCTCG GGTTGGAGGA CGGGGTGATC CTTTTCCGGT CCCCGGACCT GATCGGAGTC GGGCAGCTGG CCGACGCCGT CCGGCGCAAG AAACACGGCG ACCGGGTATA CTTCGTGGTG AATCGGCACA TCAACCACAC CAACATCTGC GTGAACGGTT GCCGGTTTTG CGCTTTCGGC AAGGAGCCGG GCGAGCCGGG CGGCTACGTG ATGTCCCTGG ACGAGATCGA GGCCCGGGCC CGCGAATCCT GGGCACTCGG CATCTCCGAA GTGCACGTCG TTGGGGGTCT GCACCCCGAC CTGAACCTGG ACTACTACCG GGAGATGCTC ACCCGGCTCC GGAACACCGT CCCCGGCGTG ATCATCCAGG CCCTGACCGC GGTCGAGGTG GACTACCTAG CCGGCCTGCA CGGGCTTGAG CTGGAGGATG TACTTACCGA ACTCCGGGCG GCTGGCCTTG ATTCCCTGCC TGGCGGCGGG GCCGAGGTTT TCGCCCCCCG GGTGCGGGAG TCGGTCTGCC CGAAAAAGAT CAGCGGTGCA CGGTGGCTCG CCGTACACGA GACGGCGCAC CGGCTGGGCA TCCGCACCAA CGCCACCATG CTCTACGGGC ATGTGGAAAC GCTGGAGGAG CGAGTCGAGC ACCTCCTACA ACTGCGGGAA CTTCAGGATC GGACCGGGGG CTTTCAGGCT TTCATCCCGC TGGCCTTCCA CCCGTGGAAC ACCGCCCTCG AACCGGAGGT GCCCGCCGGC ACTACCGGGT ACGACGATCT GAAAATGCTG GCGGTGGCGC GGCTCATGCT CGACAACTTC GACCACATCA AGGCCTTCTG GGTGATGATC GGACCCAAGC TGGCCCAGAT TTCCCTAAAC TTCGGGGTCA ACGACATCGA CGGCACGGTG GTCGAGGAAC GAATCACCCG CGCGGCCGGT GGGCAGACGG CCCATGGTCT GGAGCGCGGG GAACTCTTGC GGCTCATCCG GGCGGCGGGC CGGGTGCCGG TGGAACGCGA TACGTTGTAT AACGTGGTCA GGGAGGATTT CGCCTGA
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Protein sequence | MDFWFVDDRL EAVAGKVRNG ERLGLEDGVI LFRSPDLIGV GQLADAVRRK KHGDRVYFVV NRHINHTNIC VNGCRFCAFG KEPGEPGGYV MSLDEIEARA RESWALGISE VHVVGGLHPD LNLDYYREML TRLRNTVPGV IIQALTAVEV DYLAGLHGLE LEDVLTELRA AGLDSLPGGG AEVFAPRVRE SVCPKKISGA RWLAVHETAH RLGIRTNATM LYGHVETLEE RVEHLLQLRE LQDRTGGFQA FIPLAFHPWN TALEPEVPAG TTGYDDLKML AVARLMLDNF DHIKAFWVMI GPKLAQISLN FGVNDIDGTV VEERITRAAG GQTAHGLERG ELLRLIRAAG RVPVERDTLY NVVREDFA
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