| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1073 |
|---|
| Symbol | |
|---|
| ID | 6026934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 1128986 |
|---|
| End bp | 1130281 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641593887 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_001717217 |
|---|
| Protein GI | 169831235 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.830496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGA GGGTCATCAA GATCGGCCTT CTGGGTCTGG GTACGGTCGG CGGCGGCGTT
TATCGGGTTT TGCAGAAAAA TGCCGATCTC ATCGCACGCA AAACCGGTGT GCGGCTTGAG
GTCGCCGGTA TTCTGGTCCG GGATGTAGGC CGCGACCGGG GGTTGTCCCT GCCCCCCGGT
GTTCTGACCG ATAGGCCGGA AGACATTCTG GACGACCACA CCATACAGAT TGTGGTGGAG
GTCATGGGCG GCACGGGGCC GGCTTTCGAC TACGTACGCC GCGCCCTCAA ACGGGGGAAG
AGCGTGGTCA CCGCCAACAA GGACATGATG GCGGAACACG GGAAGGAGCT TTTCGATCTT
ACCCGCGAGG GCAAGAGCGA CCTCCTGTTC GAAGCCAGCG TGGCCGGCGG CATCCCGATC
ATCCGGGTCC TGAAACAATG TCTGGCCGCA AACCGGATTG AAGCGGTGAT GGGTATTCTG
AACGGGACCA CGAACTACAT GCTTACCCGG ATGACCGCGG AAGGAACCGA TTTCCAGACC
GTGCTGCAGG AGGCGCAAGC GCTCGGCTAC GCGGAGGCCG ATCCGACCAA CGACGTGGAG
GGTTACGACG CGGCCCGAAA AACGGCGATT CTGGCCTCTA TCGCCTTCAA CACCCGGATC
TCGTTCCCGG CCGTGTACGT TGAAGGAATT TCGCGAATTA CCGCCGAAGA TATCACTTAT
GCCACTGAAC TCGGCTACGT GATCAAGCTC CTGGGGATCG TCAAAGATAC CCCCGAGGGT
ATCGAGGTCC GGACGCACCC GGCGCTCTTG CCGCGGCAGC ACCCGTTGGC CGCCGTCAAC
GACGTTTTCA ACGCTATTTA CGTCCGCGGT GACGCGGTCG GGGAGACCAT GTTTTACGGC
CGCGGCGCCG GGGCCTTGCC GACGGCGAGT GCGGTGGTGG CCGACATCAT GGACGCGGCC
CGGAACATCG TGCACCGGGT TCCCGGAATC ATCAGCTGCA CCTGCTTCGA AGAGCGCCCG
CTCAAGGAGA TGGGGCGGGT CCGCTGCAAG AATTACCTAC GTCTCCGGGT CGTGGACCGG
CCCGGCGTGC TGGCACAGAT CGCGCGGGTG TTCGGGGATA ACCAGGTCAG CCTGGCCGCG
GTGACTCAGA AACACAGCGA GGGGACCAAG GCTGAACTGG TCCTGGTCAC ACACGAAGTG
GCCGAACAGA ACCTGCGCGA CGCCTTGGCC GGACTGACCG GGTTGGACGT GGTGGAGAGG
ATCTGCAACG TGATCAGGGT GGAGGGCGAT AGTTGA
|
|---|
| Protein sequence | MSERVIKIGL LGLGTVGGGV YRVLQKNADL IARKTGVRLE VAGILVRDVG RDRGLSLPPG
VLTDRPEDIL DDHTIQIVVE VMGGTGPAFD YVRRALKRGK SVVTANKDMM AEHGKELFDL
TREGKSDLLF EASVAGGIPI IRVLKQCLAA NRIEAVMGIL NGTTNYMLTR MTAEGTDFQT
VLQEAQALGY AEADPTNDVE GYDAARKTAI LASIAFNTRI SFPAVYVEGI SRITAEDITY
ATELGYVIKL LGIVKDTPEG IEVRTHPALL PRQHPLAAVN DVFNAIYVRG DAVGETMFYG
RGAGALPTAS AVVADIMDAA RNIVHRVPGI ISCTCFEERP LKEMGRVRCK NYLRLRVVDR
PGVLAQIARV FGDNQVSLAA VTQKHSEGTK AELVLVTHEV AEQNLRDALA GLTGLDVVER
ICNVIRVEGD S
|
|---|
| |