| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1058 |
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| Symbol | |
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| ID | 6026596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1114298 |
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| End bp | 1115515 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641593870 |
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| Product | proposed homoserine kinase |
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| Protein accession | YP_001717202 |
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| Protein GI | 169831220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3635] Predicted phosphoglycerate mutase, AP superfamily |
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| TIGRFAM ID | [TIGR00306] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form
[TIGR02535] proposed homoserine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000198822 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTTTGA AATACCTGGT GTTGGTGGGA GACGGGATGG CCGACGAGCC CCGGCCGGAA
CTGGATGGGA TGACGCCGCT GCAATACGCC CGGACGCCAC ACATGGACCT CGTGGCGGCT
TGTGGGGAGA TCGGGCAGGT ACGGACGGTG CCGGCCGGGT ACCAACCGGG CAGTGACGTG
GCCAATCTCT CGGTGCTGGG TTACGACCCG CAGAAGTATT ATACCGGACG GGCGCCGCTG
GAGGCGGTGA GCATGGGGAT CGACTTGCAG GAACGGGACG TCGCCTTCCG CTGTAACCTG
GTTACCCTCA CCGACGCGGA ACCCTACGAG GAACGGGAAA TGGTCGACTA CAGCGCCGGT
GAAATCAGCA CGGCCGAGGC CCGCGAACTG ATTCTCTTTT TGGATCGGGA GCTTGGTTCC
GAAGCGCTCC GCTTCTATCC GGGCGTCAGC TACCGGCACC TGCTGGTATG GCGGGAAGGA
CCCGTGGAAA CCCGGCTCAC CCCGCCGCAC GACATTCCGG GAATGGAGGT GCGCGCGCAC
TTGCCGGCGG GGGTTGGTGA CGGGGTACTG AAATCGCTGA TGGTACGGAG CGCCGAACTG
CTCGCCGGAC ATCCCGTGAA CCGGGCACGC CGGCAGCGAA ACGAGCGCAC GGCAAACTCC
ATCTGGTTCT GGGGGCAGGG CCGCCGGCCG GCCCTGCCTC CGTTCCGCGA CCTCTTCGGT
CTGCAGGGAG CGGTGATCTC GGCCGTCGAC CTGATCAAGG GCATCGGGCT GTGCGCCGGC
CTGGAAAGCA TCGAGGTCGA AGGCGCGACC GGGACGATTC ACACCAACTT CCGCGGAAAA
GCGGTGGCGG CGCTGAACGC CCTTGCTTCC GGAGCCGATT TCGTCCTGAT CCACGTGGAG
GCTCCGGACG AGGCCAGTCA CCACGGGGAT TTAGAAACGA AAATACGGGC GATCGAAGAG
ATCGACCAGC GAGTGTTGGG GGAGGTCCTC CGCGGGGCGA GGGACATCGG CCCTCTCAGG
ATAATGGTTC TTCCAGACCA CCCCACGCCG CTCCGAACCA GGACCCATTC CGCCGACCCG
GTGCCCTTCG CCATACTGCG GGAAGGAACC GGGGGTGGTC GTAAGGCGGA ACGGGGGTTT
GACGAAGTCT CAGCCGCGCG AAGCGGTGTC TATTTTAGAA TCGGCTGCAA GCTGATGCCT
TACTTCATCA GGCGCTAG
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| Protein sequence | MLLKYLVLVG DGMADEPRPE LDGMTPLQYA RTPHMDLVAA CGEIGQVRTV PAGYQPGSDV
ANLSVLGYDP QKYYTGRAPL EAVSMGIDLQ ERDVAFRCNL VTLTDAEPYE EREMVDYSAG
EISTAEAREL ILFLDRELGS EALRFYPGVS YRHLLVWREG PVETRLTPPH DIPGMEVRAH
LPAGVGDGVL KSLMVRSAEL LAGHPVNRAR RQRNERTANS IWFWGQGRRP ALPPFRDLFG
LQGAVISAVD LIKGIGLCAG LESIEVEGAT GTIHTNFRGK AVAALNALAS GADFVLIHVE
APDEASHHGD LETKIRAIEE IDQRVLGEVL RGARDIGPLR IMVLPDHPTP LRTRTHSADP
VPFAILREGT GGGRKAERGF DEVSAARSGV YFRIGCKLMP YFIRR
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