| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1038 |
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| Symbol | |
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| ID | 6027425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | + |
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| Start bp | 1088405 |
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| End bp | 1089415 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641593850 |
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| Product | isocitrate dehydrogenase (NAD(+)) |
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| Protein accession | YP_001717182 |
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| Protein GI | 169831200 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGCACA CCGTAACCTT TATTCCCGGG GACGGGGTCG GTCCTGAGAT CATGGCGGTG
GCCCGGCATG TACTGGAGGC GTCCGGTGCG TCCCTGGCAT GGGAAGAAGT GCGGGCGGGC
GAGGCGGTGA TTCCCGAGTT CGGCACGCCT CTGCCGCAGG AGGTTCTGGA TTCCATCCGC
AAAAACCGGG TGGCGCTGAA AGGGCCGCTG ACCACGCCGG TAGGGCGAGG GTTCCGCAGT
GTAAACGTCA CTTTGCGTCA GGAACTGGAG CTCTACGCGA ACGTCCGGCC GGCCCGGTCC
CTGCCGGGAA TCCGATCCCG TTACGAAAAC GTTGACCTGA TCGTGGTCCG GGAAAACACC
GAGGACCTCT ACGCGGGCAT CGAGCACTGG TGCGGCCGGG ATGCGGCCGA GAGCATCAAG
CTGATTACCC GGCCGGCCTC GGAGCGTATC GTCCGCTTCG CCTTCGAACT GGCCCGGCGT
GAGCGGCGCC GGAAGGTCAC CGCCGTGCAC AAGGCCAACA TTATGAAGTT CACCGACGGG
CTCTTCCTGG AGTGCGCCCG CAAGGTCGCG GAAGGTTACC CCGACGTGAC CTACGAAGAA
TGGATTGTGG ACGCAATGGC CATGAAGCTG GTTCAAGCGC CAGAAAACTT CGACGTGCTG
GTCATGCCGA ACCTGTACGG AGACATCCTT TCCGATTTGT GTGCTGGTCT GGTGGGGGGC
CTGGGTGTGG CTCCGGGCGC CAACATCGGC GAAAAGGCAG CCGTTTTCGA ACCGGTCCAC
GGGAGCGCCC CCAAGTATAC CGGCCAGAAC AAGGTCAATC CGCTGGCCGC CGTTCTTTCG
GGCGTGATGC TGCTGCGTCA TTTAGGTGAA GCCGAGGCGG CCGAACGGGT CATGCGCGGC
GTGCTTGCGG TCTTGGAACA GGGGGACACC CTCACCTACG ATCTGGGGGG TACGGCGGGT
ACTGACGAGA TGGGTGCGGC CATCATCCGC GCCATGGCAA AGACGTCCTG A
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| Protein sequence | MTHTVTFIPG DGVGPEIMAV ARHVLEASGA SLAWEEVRAG EAVIPEFGTP LPQEVLDSIR
KNRVALKGPL TTPVGRGFRS VNVTLRQELE LYANVRPARS LPGIRSRYEN VDLIVVRENT
EDLYAGIEHW CGRDAAESIK LITRPASERI VRFAFELARR ERRRKVTAVH KANIMKFTDG
LFLECARKVA EGYPDVTYEE WIVDAMAMKL VQAPENFDVL VMPNLYGDIL SDLCAGLVGG
LGVAPGANIG EKAAVFEPVH GSAPKYTGQN KVNPLAAVLS GVMLLRHLGE AEAAERVMRG
VLAVLEQGDT LTYDLGGTAG TDEMGAAIIR AMAKTS
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